Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 AL034346.1-201ENST00000568244 1277 ntBASIC18■□□□□ 0.47
TRAV18A0A075B6X5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 PLK5-205ENST00000642079 1969 ntBASIC18■□□□□ 0.47
TRAV18A0A075B6X5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV18A0A075B6X5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 AC006455.2-201ENST00000429931 906 ntBASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 AC010141.3-201ENST00000456659 717 ntBASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV18A0A075B6X5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 AFG3L1P-217ENST00000557444 2447 ntBASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 MIR4787-201ENST00000607364 84 ntBASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV18A0A075B6X5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV18A0A075B6X5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 TSPY9P-201ENST00000440215 945 ntBASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 TSPY11P-201ENST00000442607 1045 ntBASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV18A0A075B6X5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms