Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Herpud1Q9JJK5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Herpud1Q9JJK5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Herpud1Q9JJK5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.45■□□□□ 0.86
Herpud1Q9JJK5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Herpud1Q9JJK5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Herpud1Q9JJK5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Herpud1Q9JJK5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.43■□□□□ 0.86
Herpud1Q9JJK5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Herpud1Q9JJK5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Herpud1Q9JJK5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Herpud1Q9JJK5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Herpud1Q9JJK5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Herpud1Q9JJK5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Herpud1Q9JJK5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Herpud1Q9JJK5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Herpud1Q9JJK5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Herpud1Q9JJK5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Herpud1Q9JJK5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Herpud1Q9JJK5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Herpud1Q9JJK5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Herpud1Q9JJK5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herpud1Q9JJK5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herpud1Q9JJK5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herpud1Q9JJK5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Herpud1Q9JJK5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Herpud1Q9JJK5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.36■□□□□ 0.85
Herpud1Q9JJK5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herpud1Q9JJK5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Herpud1Q9JJK5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herpud1Q9JJK5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Herpud1Q9JJK5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.34■□□□□ 0.85
Herpud1Q9JJK5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Herpud1Q9JJK5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Herpud1Q9JJK5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Herpud1Q9JJK5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Herpud1Q9JJK5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Herpud1Q9JJK5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Herpud1Q9JJK5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Herpud1Q9JJK5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Herpud1Q9JJK5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Herpud1Q9JJK5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud1Q9JJK5 Gm16148-201ENSMUST00000119653 893 ntBASIC20.32■□□□□ 0.84
Herpud1Q9JJK5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Herpud1Q9JJK5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.31■□□□□ 0.84
Herpud1Q9JJK5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Herpud1Q9JJK5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Herpud1Q9JJK5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Herpud1Q9JJK5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Herpud1Q9JJK5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.28■□□□□ 0.84
Herpud1Q9JJK5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Herpud1Q9JJK5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Herpud1Q9JJK5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Herpud1Q9JJK5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Herpud1Q9JJK5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Herpud1Q9JJK5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Herpud1Q9JJK5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herpud1Q9JJK5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Herpud1Q9JJK5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herpud1Q9JJK5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.25■□□□□ 0.83
Herpud1Q9JJK5 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.25■□□□□ 0.83
Herpud1Q9JJK5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herpud1Q9JJK5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Herpud1Q9JJK5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.23■□□□□ 0.83
Herpud1Q9JJK5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Herpud1Q9JJK5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud1Q9JJK5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Herpud1Q9JJK5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud1Q9JJK5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Herpud1Q9JJK5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.21■□□□□ 0.83
Herpud1Q9JJK5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Herpud1Q9JJK5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herpud1Q9JJK5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herpud1Q9JJK5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herpud1Q9JJK5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herpud1Q9JJK5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Herpud1Q9JJK5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herpud1Q9JJK5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Herpud1Q9JJK5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud1Q9JJK5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud1Q9JJK5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud1Q9JJK5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.18■□□□□ 0.82
Herpud1Q9JJK5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud1Q9JJK5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud1Q9JJK5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herpud1Q9JJK5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Herpud1Q9JJK5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud1Q9JJK5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud1Q9JJK5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Herpud1Q9JJK5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.14■□□□□ 0.81
Herpud1Q9JJK5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Herpud1Q9JJK5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Herpud1Q9JJK5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Herpud1Q9JJK5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Herpud1Q9JJK5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud1Q9JJK5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud1Q9JJK5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud1Q9JJK5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud1Q9JJK5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Herpud1Q9JJK5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms