Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61bQ9CQS8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sec61bQ9CQS8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.35□□□□□ -0.27
Sec61bQ9CQS8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sec61bQ9CQS8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61bQ9CQS8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC13.34□□□□□ -0.27
Sec61bQ9CQS8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61bQ9CQS8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Sec61bQ9CQS8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC13.32□□□□□ -0.28
Sec61bQ9CQS8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61bQ9CQS8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61bQ9CQS8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61bQ9CQS8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC13.32□□□□□ -0.28
Sec61bQ9CQS8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61bQ9CQS8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sec61bQ9CQS8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sec61bQ9CQS8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC13.3□□□□□ -0.28
Sec61bQ9CQS8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC13.3□□□□□ -0.28
Sec61bQ9CQS8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sec61bQ9CQS8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sec61bQ9CQS8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sec61bQ9CQS8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sec61bQ9CQS8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sec61bQ9CQS8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61bQ9CQS8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61bQ9CQS8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61bQ9CQS8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sec61bQ9CQS8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC13.27□□□□□ -0.29
Sec61bQ9CQS8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61bQ9CQS8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61bQ9CQS8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sec61bQ9CQS8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sec61bQ9CQS8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61bQ9CQS8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61bQ9CQS8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.25□□□□□ -0.29
Sec61bQ9CQS8 Nkain2-201ENSMUST00000092602 558 ntBASIC13.25□□□□□ -0.29
Sec61bQ9CQS8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC13.25□□□□□ -0.29
Sec61bQ9CQS8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sec61bQ9CQS8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61bQ9CQS8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61bQ9CQS8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61bQ9CQS8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sec61bQ9CQS8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61bQ9CQS8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61bQ9CQS8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61bQ9CQS8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.22□□□□□ -0.29
Sec61bQ9CQS8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61bQ9CQS8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61bQ9CQS8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61bQ9CQS8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61bQ9CQS8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sec61bQ9CQS8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61bQ9CQS8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61bQ9CQS8 Gm42809-201ENSMUST00000198429 1138 ntBASIC13.2□□□□□ -0.3
Sec61bQ9CQS8 Gm2415-204ENSMUST00000190235 2004 ntBASIC13.2□□□□□ -0.3
Sec61bQ9CQS8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61bQ9CQS8 Gm30346-201ENSMUST00000218641 1699 ntBASIC13.19□□□□□ -0.3
Sec61bQ9CQS8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61bQ9CQS8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61bQ9CQS8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61bQ9CQS8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61bQ9CQS8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61bQ9CQS8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61bQ9CQS8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61bQ9CQS8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sec61bQ9CQS8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sec61bQ9CQS8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC13.18□□□□□ -0.3
Sec61bQ9CQS8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61bQ9CQS8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC13.17□□□□□ -0.3
Sec61bQ9CQS8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61bQ9CQS8 Gm7432-201ENSMUST00000210343 879 ntBASIC13.17□□□□□ -0.3
Sec61bQ9CQS8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sec61bQ9CQS8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sec61bQ9CQS8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61bQ9CQS8 Gm6658-202ENSMUST00000209493 1885 ntBASIC13.16□□□□□ -0.3
Sec61bQ9CQS8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13.16□□□□□ -0.3
Sec61bQ9CQS8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Sec61bQ9CQS8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61bQ9CQS8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61bQ9CQS8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61bQ9CQS8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61bQ9CQS8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61bQ9CQS8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61bQ9CQS8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61bQ9CQS8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61bQ9CQS8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC13.14□□□□□ -0.31
Sec61bQ9CQS8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC13.14□□□□□ -0.31
Sec61bQ9CQS8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61bQ9CQS8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61bQ9CQS8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61bQ9CQS8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Sec61bQ9CQS8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61bQ9CQS8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61bQ9CQS8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61bQ9CQS8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61bQ9CQS8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61bQ9CQS8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61bQ9CQS8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61bQ9CQS8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61bQ9CQS8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms