Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31,36■■■□□ 2,61
Trim34aQ99PP6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31,36■■■□□ 2,61
Trim34aQ99PP6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31,35■■■□□ 2,61
Trim34aQ99PP6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Trim34aQ99PP6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Trim34aQ99PP6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31,35■■■□□ 2,61
Trim34aQ99PP6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31,33■■■□□ 2,61
Trim34aQ99PP6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31,33■■■□□ 2,61
Trim34aQ99PP6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31,32■■■□□ 2,6
Trim34aQ99PP6 Gm6658-202ENSMUST00000209493 1885 ntBASIC31,31■■■□□ 2,6
Trim34aQ99PP6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Trim34aQ99PP6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Trim34aQ99PP6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31,3■■■□□ 2,6
Trim34aQ99PP6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31,3■■■□□ 2,6
Trim34aQ99PP6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31,3■■■□□ 2,6
Trim34aQ99PP6 Gm42809-201ENSMUST00000198429 1138 ntBASIC31,3■■■□□ 2,6
Trim34aQ99PP6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31,28■■■□□ 2,6
Trim34aQ99PP6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31,26■■■□□ 2,6
Trim34aQ99PP6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31,25■■■□□ 2,59
Trim34aQ99PP6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31,24■■■□□ 2,59
Trim34aQ99PP6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31,24■■■□□ 2,59
Trim34aQ99PP6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31,23■■■□□ 2,59
Trim34aQ99PP6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Trim34aQ99PP6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31,2■■■□□ 2,59
Trim34aQ99PP6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31,19■■■□□ 2,58
Trim34aQ99PP6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31,18■■■□□ 2,58
Trim34aQ99PP6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
Trim34aQ99PP6 Nkain2-201ENSMUST00000092602 558 ntBASIC31,18■■■□□ 2,58
Trim34aQ99PP6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31,17■■■□□ 2,58
Trim34aQ99PP6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31,17■■■□□ 2,58
Trim34aQ99PP6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31,16■■■□□ 2,58
Trim34aQ99PP6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31,16■■■□□ 2,58
Trim34aQ99PP6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31,16■■■□□ 2,58
Trim34aQ99PP6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31,16■■■□□ 2,58
Trim34aQ99PP6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31,15■■■□□ 2,58
Trim34aQ99PP6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31,15■■■□□ 2,58
Trim34aQ99PP6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
Trim34aQ99PP6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
Trim34aQ99PP6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,57
Trim34aQ99PP6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31,13■■■□□ 2,57
Trim34aQ99PP6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31,13■■■□□ 2,57
Trim34aQ99PP6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31,12■■■□□ 2,57
Trim34aQ99PP6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31,12■■■□□ 2,57
Trim34aQ99PP6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31,11■■■□□ 2,57
Trim34aQ99PP6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31,11■■■□□ 2,57
Trim34aQ99PP6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31,09■■■□□ 2,57
Trim34aQ99PP6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31,09■■■□□ 2,57
Trim34aQ99PP6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31,09■■■□□ 2,57
Trim34aQ99PP6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Trim34aQ99PP6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Trim34aQ99PP6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31,07■■■□□ 2,56
Trim34aQ99PP6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31,06■■■□□ 2,56
Trim34aQ99PP6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31,04■■■□□ 2,56
Trim34aQ99PP6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31,04■■■□□ 2,56
Trim34aQ99PP6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31,03■■■□□ 2,56
Trim34aQ99PP6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30,99■■■□□ 2,55
Trim34aQ99PP6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30,98■■■□□ 2,55
Trim34aQ99PP6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30,98■■■□□ 2,55
Trim34aQ99PP6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30,98■■■□□ 2,55
Trim34aQ99PP6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Trim34aQ99PP6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30,96■■■□□ 2,55
Trim34aQ99PP6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30,95■■■□□ 2,55
Trim34aQ99PP6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30,95■■■□□ 2,54
Trim34aQ99PP6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30,93■■■□□ 2,54
Trim34aQ99PP6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30,93■■■□□ 2,54
Trim34aQ99PP6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
Trim34aQ99PP6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30,91■■■□□ 2,54
Trim34aQ99PP6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30,91■■■□□ 2,54
Trim34aQ99PP6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30,9■■■□□ 2,54
Trim34aQ99PP6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Trim34aQ99PP6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Trim34aQ99PP6 Gm7432-201ENSMUST00000210343 879 ntBASIC30,88■■■□□ 2,53
Trim34aQ99PP6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30,88■■■□□ 2,53
Trim34aQ99PP6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30,86■■■□□ 2,53
Trim34aQ99PP6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30,86■■■□□ 2,53
Trim34aQ99PP6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Trim34aQ99PP6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30,84■■■□□ 2,53
Trim34aQ99PP6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30,84■■■□□ 2,53
Trim34aQ99PP6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30,84■■■□□ 2,53
Trim34aQ99PP6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30,84■■■□□ 2,53
Trim34aQ99PP6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30,83■■■□□ 2,53
Trim34aQ99PP6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30,81■■■□□ 2,52
Trim34aQ99PP6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30,81■■■□□ 2,52
Trim34aQ99PP6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
Trim34aQ99PP6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30,8■■■□□ 2,52
Trim34aQ99PP6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30,79■■■□□ 2,52
Trim34aQ99PP6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30,79■■■□□ 2,52
Trim34aQ99PP6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30,78■■■□□ 2,52
Trim34aQ99PP6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30,77■■■□□ 2,52
Trim34aQ99PP6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30,76■■■□□ 2,51
Trim34aQ99PP6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30,76■■■□□ 2,51
Trim34aQ99PP6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30,75■■■□□ 2,51
Trim34aQ99PP6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Trim34aQ99PP6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30,74■■■□□ 2,51
Trim34aQ99PP6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30,73■■■□□ 2,51
Trim34aQ99PP6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30,73■■■□□ 2,51
Trim34aQ99PP6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30,7■■■□□ 2,51
Trim34aQ99PP6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30,7■■■□□ 2,5
Trim34aQ99PP6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30,68■■■□□ 2,5
Trim34aQ99PP6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30,67■■■□□ 2,5
Retrieved 100 of 76,532 protein–RNA pairs in 11,2 ms