Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.36■■■□□ 2.61
Trim34aQ99PP6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Trim34aQ99PP6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Trim34aQ99PP6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Trim34aQ99PP6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Trim34aQ99PP6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.35■■■□□ 2.61
Trim34aQ99PP6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Trim34aQ99PP6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.33■■■□□ 2.61
Trim34aQ99PP6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Trim34aQ99PP6 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.31■■■□□ 2.6
Trim34aQ99PP6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Trim34aQ99PP6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trim34aQ99PP6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Trim34aQ99PP6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
Trim34aQ99PP6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.3■■■□□ 2.6
Trim34aQ99PP6 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.3■■■□□ 2.6
Trim34aQ99PP6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Trim34aQ99PP6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Trim34aQ99PP6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Trim34aQ99PP6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
Trim34aQ99PP6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
Trim34aQ99PP6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.23■■■□□ 2.59
Trim34aQ99PP6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Trim34aQ99PP6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Trim34aQ99PP6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Trim34aQ99PP6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trim34aQ99PP6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trim34aQ99PP6 Nkain2-201ENSMUST00000092602 558 ntBASIC31.18■■■□□ 2.58
Trim34aQ99PP6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Trim34aQ99PP6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Trim34aQ99PP6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Trim34aQ99PP6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trim34aQ99PP6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.16■■■□□ 2.58
Trim34aQ99PP6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Trim34aQ99PP6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Trim34aQ99PP6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Trim34aQ99PP6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trim34aQ99PP6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trim34aQ99PP6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Trim34aQ99PP6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Trim34aQ99PP6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Trim34aQ99PP6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
Trim34aQ99PP6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Trim34aQ99PP6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Trim34aQ99PP6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trim34aQ99PP6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Trim34aQ99PP6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Trim34aQ99PP6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Trim34aQ99PP6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trim34aQ99PP6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trim34aQ99PP6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.07■■■□□ 2.56
Trim34aQ99PP6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Trim34aQ99PP6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.04■■■□□ 2.56
Trim34aQ99PP6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Trim34aQ99PP6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Trim34aQ99PP6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.99■■■□□ 2.55
Trim34aQ99PP6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Trim34aQ99PP6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Trim34aQ99PP6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.98■■■□□ 2.55
Trim34aQ99PP6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Trim34aQ99PP6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.96■■■□□ 2.55
Trim34aQ99PP6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Trim34aQ99PP6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Trim34aQ99PP6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.93■■■□□ 2.54
Trim34aQ99PP6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Trim34aQ99PP6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim34aQ99PP6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Trim34aQ99PP6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Trim34aQ99PP6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Trim34aQ99PP6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Trim34aQ99PP6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Trim34aQ99PP6 Gm7432-201ENSMUST00000210343 879 ntBASIC30.88■■■□□ 2.53
Trim34aQ99PP6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.88■■■□□ 2.53
Trim34aQ99PP6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
Trim34aQ99PP6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
Trim34aQ99PP6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Trim34aQ99PP6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.84■■■□□ 2.53
Trim34aQ99PP6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.84■■■□□ 2.53
Trim34aQ99PP6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.84■■■□□ 2.53
Trim34aQ99PP6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Trim34aQ99PP6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Trim34aQ99PP6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Trim34aQ99PP6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trim34aQ99PP6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Trim34aQ99PP6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.8■■■□□ 2.52
Trim34aQ99PP6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Trim34aQ99PP6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.79■■■□□ 2.52
Trim34aQ99PP6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trim34aQ99PP6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.77■■■□□ 2.52
Trim34aQ99PP6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Trim34aQ99PP6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
Trim34aQ99PP6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Trim34aQ99PP6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Trim34aQ99PP6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim34aQ99PP6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.73■■■□□ 2.51
Trim34aQ99PP6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Trim34aQ99PP6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Trim34aQ99PP6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Trim34aQ99PP6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Trim34aQ99PP6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.67■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms