Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rtn4Q99P72 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rtn4Q99P72 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rtn4Q99P72 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Rtn4Q99P72 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.08■■■□□ 2.57
Rtn4Q99P72 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Rtn4Q99P72 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Rtn4Q99P72 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Rtn4Q99P72 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Rtn4Q99P72 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Rtn4Q99P72 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Rtn4Q99P72 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rtn4Q99P72 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rtn4Q99P72 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.03■■■□□ 2.56
Rtn4Q99P72 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Rtn4Q99P72 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Rtn4Q99P72 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31■■■□□ 2.55
Rtn4Q99P72 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31■■■□□ 2.55
Rtn4Q99P72 Gm6821-201ENSMUST00000107540 542 ntBASIC30.99■■■□□ 2.55
Rtn4Q99P72 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rtn4Q99P72 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rtn4Q99P72 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Rtn4Q99P72 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rtn4Q99P72 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rtn4Q99P72 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Rtn4Q99P72 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Rtn4Q99P72 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
Rtn4Q99P72 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.94■■■□□ 2.54
Rtn4Q99P72 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Rtn4Q99P72 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rtn4Q99P72 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Rtn4Q99P72 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rtn4Q99P72 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.89■■■□□ 2.54
Rtn4Q99P72 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Rtn4Q99P72 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rtn4Q99P72 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.87■■■□□ 2.53
Rtn4Q99P72 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtn4Q99P72 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.87■■■□□ 2.53
Rtn4Q99P72 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.87■■■□□ 2.53
Rtn4Q99P72 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtn4Q99P72 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Rtn4Q99P72 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtn4Q99P72 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rtn4Q99P72 Gm8503-201ENSMUST00000118131 455 ntBASIC30.83■■■□□ 2.53
Rtn4Q99P72 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rtn4Q99P72 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rtn4Q99P72 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rtn4Q99P72 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.81■■■□□ 2.52
Rtn4Q99P72 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rtn4Q99P72 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rtn4Q99P72 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.8■■■□□ 2.52
Rtn4Q99P72 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rtn4Q99P72 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rtn4Q99P72 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.8■■■□□ 2.52
Rtn4Q99P72 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rtn4Q99P72 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.79■■■□□ 2.52
Rtn4Q99P72 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Rtn4Q99P72 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Rtn4Q99P72 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Rtn4Q99P72 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rtn4Q99P72 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rtn4Q99P72 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rtn4Q99P72 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Rtn4Q99P72 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Rtn4Q99P72 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Rtn4Q99P72 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Rtn4Q99P72 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Rtn4Q99P72 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtn4Q99P72 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtn4Q99P72 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rtn4Q99P72 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rtn4Q99P72 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rtn4Q99P72 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rtn4Q99P72 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Rtn4Q99P72 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.66■■■□□ 2.5
Rtn4Q99P72 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rtn4Q99P72 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Rtn4Q99P72 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.64■■■□□ 2.5
Rtn4Q99P72 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Rtn4Q99P72 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rtn4Q99P72 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rtn4Q99P72 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Rtn4Q99P72 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rtn4Q99P72 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
Rtn4Q99P72 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rtn4Q99P72 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rtn4Q99P72 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.6■■■□□ 2.49
Rtn4Q99P72 Nkain2-201ENSMUST00000092602 558 ntBASIC30.6■■■□□ 2.49
Rtn4Q99P72 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rtn4Q99P72 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rtn4Q99P72 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.57■■■□□ 2.48
Rtn4Q99P72 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Rtn4Q99P72 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rtn4Q99P72 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rtn4Q99P72 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rtn4Q99P72 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Rtn4Q99P72 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Rtn4Q99P72 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Rtn4Q99P72 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.54■■■□□ 2.48
Rtn4Q99P72 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms