Protein–RNA interactions for Protein: Q99K95

Rtfdc1, Protein RTF2 homolog, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1Q99K95 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtfdc1Q99K95 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.47■■□□□ 1.99
Rtfdc1Q99K95 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtfdc1Q99K95 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtfdc1Q99K95 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtfdc1Q99K95 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rtfdc1Q99K95 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rtfdc1Q99K95 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.43■■□□□ 1.98
Rtfdc1Q99K95 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Rtfdc1Q99K95 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rtfdc1Q99K95 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rtfdc1Q99K95 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rtfdc1Q99K95 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Rtfdc1Q99K95 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Rtfdc1Q99K95 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rtfdc1Q99K95 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Rtfdc1Q99K95 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.36■■□□□ 1.97
Rtfdc1Q99K95 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rtfdc1Q99K95 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rtfdc1Q99K95 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.34■■□□□ 1.97
Rtfdc1Q99K95 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.34■■□□□ 1.97
Rtfdc1Q99K95 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
Rtfdc1Q99K95 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Rtfdc1Q99K95 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rtfdc1Q99K95 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rtfdc1Q99K95 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rtfdc1Q99K95 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rtfdc1Q99K95 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rtfdc1Q99K95 Gm6821-201ENSMUST00000107540 542 ntBASIC27.31■■□□□ 1.96
Rtfdc1Q99K95 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rtfdc1Q99K95 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rtfdc1Q99K95 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Rtfdc1Q99K95 Gm8503-201ENSMUST00000118131 455 ntBASIC27.29■■□□□ 1.96
Rtfdc1Q99K95 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rtfdc1Q99K95 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Rtfdc1Q99K95 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rtfdc1Q99K95 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
Rtfdc1Q99K95 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rtfdc1Q99K95 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rtfdc1Q99K95 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Rtfdc1Q99K95 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rtfdc1Q99K95 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rtfdc1Q99K95 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rtfdc1Q99K95 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Rtfdc1Q99K95 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rtfdc1Q99K95 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.24■■□□□ 1.95
Rtfdc1Q99K95 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rtfdc1Q99K95 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rtfdc1Q99K95 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rtfdc1Q99K95 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Rtfdc1Q99K95 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rtfdc1Q99K95 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
Rtfdc1Q99K95 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Rtfdc1Q99K95 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.19■■□□□ 1.94
Rtfdc1Q99K95 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.17■■□□□ 1.94
Rtfdc1Q99K95 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtfdc1Q99K95 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtfdc1Q99K95 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rtfdc1Q99K95 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.14■■□□□ 1.94
Rtfdc1Q99K95 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Rtfdc1Q99K95 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtfdc1Q99K95 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Rtfdc1Q99K95 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Rtfdc1Q99K95 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.1■■□□□ 1.93
Rtfdc1Q99K95 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.1■■□□□ 1.93
Rtfdc1Q99K95 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Rtfdc1Q99K95 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rtfdc1Q99K95 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rtfdc1Q99K95 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rtfdc1Q99K95 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rtfdc1Q99K95 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.07■■□□□ 1.92
Rtfdc1Q99K95 Nkain2-201ENSMUST00000092602 558 ntBASIC27.07■■□□□ 1.92
Rtfdc1Q99K95 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rtfdc1Q99K95 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Rtfdc1Q99K95 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.03■■□□□ 1.92
Rtfdc1Q99K95 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rtfdc1Q99K95 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rtfdc1Q99K95 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.02■■□□□ 1.92
Rtfdc1Q99K95 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rtfdc1Q99K95 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.02■■□□□ 1.92
Rtfdc1Q99K95 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Rtfdc1Q99K95 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.01■■□□□ 1.91
Rtfdc1Q99K95 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Rtfdc1Q99K95 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27■■□□□ 1.91
Rtfdc1Q99K95 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Rtfdc1Q99K95 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rtfdc1Q99K95 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.98■■□□□ 1.91
Rtfdc1Q99K95 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.97■■□□□ 1.91
Rtfdc1Q99K95 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
Rtfdc1Q99K95 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
Rtfdc1Q99K95 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Rtfdc1Q99K95 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rtfdc1Q99K95 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.91
Rtfdc1Q99K95 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Rtfdc1Q99K95 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
Rtfdc1Q99K95 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
Rtfdc1Q99K95 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rtfdc1Q99K95 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rtfdc1Q99K95 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.92■■□□□ 1.9
Rtfdc1Q99K95 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms