Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Col20a1Q923P0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Col20a1Q923P0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Col20a1Q923P0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col20a1Q923P0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col20a1Q923P0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col20a1Q923P0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Col20a1Q923P0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col20a1Q923P0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Col20a1Q923P0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Col20a1Q923P0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Col20a1Q923P0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Col20a1Q923P0 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.78■■■□□ 2.36
Col20a1Q923P0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
Col20a1Q923P0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
Col20a1Q923P0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Col20a1Q923P0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Col20a1Q923P0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Col20a1Q923P0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.75■■■□□ 2.35
Col20a1Q923P0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Col20a1Q923P0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Col20a1Q923P0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.74■■■□□ 2.35
Col20a1Q923P0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Col20a1Q923P0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.73■■■□□ 2.35
Col20a1Q923P0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Col20a1Q923P0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Col20a1Q923P0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Col20a1Q923P0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Col20a1Q923P0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Col20a1Q923P0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Col20a1Q923P0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col20a1Q923P0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col20a1Q923P0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
Col20a1Q923P0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
Col20a1Q923P0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
Col20a1Q923P0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.68■■■□□ 2.34
Col20a1Q923P0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col20a1Q923P0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col20a1Q923P0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
Col20a1Q923P0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Col20a1Q923P0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Col20a1Q923P0 Gm8503-201ENSMUST00000118131 455 ntBASIC29.66■■■□□ 2.34
Col20a1Q923P0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.66■■■□□ 2.34
Col20a1Q923P0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Col20a1Q923P0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Col20a1Q923P0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Col20a1Q923P0 Gm6821-201ENSMUST00000107540 542 ntBASIC29.62■■■□□ 2.33
Col20a1Q923P0 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.61■■■□□ 2.33
Col20a1Q923P0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Col20a1Q923P0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Col20a1Q923P0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Col20a1Q923P0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col20a1Q923P0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Col20a1Q923P0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Col20a1Q923P0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Col20a1Q923P0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
Col20a1Q923P0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.56■■■□□ 2.32
Col20a1Q923P0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Col20a1Q923P0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Col20a1Q923P0 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.52■■■□□ 2.32
Col20a1Q923P0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Col20a1Q923P0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Col20a1Q923P0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Col20a1Q923P0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.49■■■□□ 2.31
Col20a1Q923P0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.49■■■□□ 2.31
Col20a1Q923P0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Col20a1Q923P0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.48■■■□□ 2.31
Col20a1Q923P0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Col20a1Q923P0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Col20a1Q923P0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.48■■■□□ 2.31
Col20a1Q923P0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Col20a1Q923P0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Col20a1Q923P0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Col20a1Q923P0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Col20a1Q923P0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.44■■■□□ 2.3
Col20a1Q923P0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Col20a1Q923P0 Nkain2-201ENSMUST00000092602 558 ntBASIC29.43■■■□□ 2.3
Col20a1Q923P0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Col20a1Q923P0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.42■■■□□ 2.3
Col20a1Q923P0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Col20a1Q923P0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Col20a1Q923P0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Col20a1Q923P0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
Col20a1Q923P0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Col20a1Q923P0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.29
Col20a1Q923P0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Col20a1Q923P0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Col20a1Q923P0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.37■■■□□ 2.29
Col20a1Q923P0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Col20a1Q923P0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Col20a1Q923P0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Col20a1Q923P0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.31■■■□□ 2.28
Col20a1Q923P0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Col20a1Q923P0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Col20a1Q923P0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Col20a1Q923P0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Col20a1Q923P0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.29■■■□□ 2.28
Col20a1Q923P0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Col20a1Q923P0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Col20a1Q923P0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.28■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 798.7 ms