Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC38,71■■■■□ 3,79
Abca8bQ8K440 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC38,7■■■■□ 3,79
Abca8bQ8K440 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC38,68■■■■□ 3,78
Abca8bQ8K440 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC38,68■■■■□ 3,78
Abca8bQ8K440 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC38,68■■■■□ 3,78
Abca8bQ8K440 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC38,67■■■■□ 3,78
Abca8bQ8K440 Gm7432-201ENSMUST00000210343 879 ntBASIC38,67■■■■□ 3,78
Abca8bQ8K440 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC38,65■■■■□ 3,78
Abca8bQ8K440 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC38,64■■■■□ 3,78
Abca8bQ8K440 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC38,64■■■■□ 3,78
Abca8bQ8K440 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC38,64■■■■□ 3,78
Abca8bQ8K440 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC38,63■■■■□ 3,78
Abca8bQ8K440 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC38,62■■■■□ 3,77
Abca8bQ8K440 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC38,61■■■■□ 3,77
Abca8bQ8K440 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC38,59■■■■□ 3,77
Abca8bQ8K440 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC38,56■■■■□ 3,76
Abca8bQ8K440 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC38,54■■■■□ 3,76
Abca8bQ8K440 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC38,52■■■■□ 3,76
Abca8bQ8K440 Gm11599-201ENSMUST00000118720 878 ntBASIC38,5■■■■□ 3,75
Abca8bQ8K440 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC38,5■■■■□ 3,75
Abca8bQ8K440 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC38,5■■■■□ 3,75
Abca8bQ8K440 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC38,5■■■■□ 3,75
Abca8bQ8K440 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC38,49■■■■□ 3,75
Abca8bQ8K440 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC38,49■■■■□ 3,75
Abca8bQ8K440 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC38,48■■■■□ 3,75
Abca8bQ8K440 Gm30346-201ENSMUST00000218641 1699 ntBASIC38,47■■■■□ 3,75
Abca8bQ8K440 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC38,47■■■■□ 3,75
Abca8bQ8K440 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC38,47■■■■□ 3,75
Abca8bQ8K440 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC38,47■■■■□ 3,75
Abca8bQ8K440 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC38,47■■■■□ 3,75
Abca8bQ8K440 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC38,47■■■■□ 3,75
Abca8bQ8K440 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC38,46■■■■□ 3,75
Abca8bQ8K440 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC38,46■■■■□ 3,75
Abca8bQ8K440 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC38,46■■■■□ 3,75
Abca8bQ8K440 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC38,46■■■■□ 3,75
Abca8bQ8K440 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC38,46■■■■□ 3,75
Abca8bQ8K440 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC38,45■■■■□ 3,75
Abca8bQ8K440 Mir6538-201ENSMUST00000183713 110 ntBASIC38,45■■■■□ 3,75
Abca8bQ8K440 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC38,43■■■■□ 3,74
Abca8bQ8K440 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC38,43■■■■□ 3,74
Abca8bQ8K440 Gm11175-201ENSMUST00000116172 543 ntBASIC38,42■■■■□ 3,74
Abca8bQ8K440 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC38,41■■■■□ 3,74
Abca8bQ8K440 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC38,41■■■■□ 3,74
Abca8bQ8K440 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC38,4■■■■□ 3,74
Abca8bQ8K440 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC38,37■■■■□ 3,73
Abca8bQ8K440 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC38,36■■■■□ 3,73
Abca8bQ8K440 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC38,35■■■■□ 3,73
Abca8bQ8K440 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC38,35■■■■□ 3,73
Abca8bQ8K440 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC38,34■■■■□ 3,73
Abca8bQ8K440 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC38,33■■■■□ 3,73
Abca8bQ8K440 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC38,32■■■■□ 3,72
Abca8bQ8K440 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC38,31■■■■□ 3,72
Abca8bQ8K440 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC38,31■■■■□ 3,72
Abca8bQ8K440 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC38,3■■■■□ 3,72
Abca8bQ8K440 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC38,27■■■■□ 3,72
Abca8bQ8K440 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC38,26■■■■□ 3,72
Abca8bQ8K440 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC38,24■■■■□ 3,71
Abca8bQ8K440 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC38,24■■■■□ 3,71
Abca8bQ8K440 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC38,23■■■■□ 3,71
Abca8bQ8K440 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC38,22■■■■□ 3,71
Abca8bQ8K440 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC38,19■■■■□ 3,7
Abca8bQ8K440 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC38,19■■■■□ 3,7
Abca8bQ8K440 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC38,19■■■■□ 3,7
Abca8bQ8K440 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC38,19■■■■□ 3,7
Abca8bQ8K440 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC38,19■■■■□ 3,7
Abca8bQ8K440 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC38,16■■■■□ 3,7
Abca8bQ8K440 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC38,16■■■■□ 3,7
Abca8bQ8K440 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC38,16■■■■□ 3,7
Abca8bQ8K440 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC38,16■■■■□ 3,7
Abca8bQ8K440 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC38,16■■■■□ 3,7
Abca8bQ8K440 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC38,16■■■■□ 3,7
Abca8bQ8K440 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC38,14■■■■□ 3,7
Abca8bQ8K440 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC38,14■■■■□ 3,7
Abca8bQ8K440 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC38,14■■■■□ 3,7
Abca8bQ8K440 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC38,12■■■■□ 3,69
Abca8bQ8K440 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC38,12■■■■□ 3,69
Abca8bQ8K440 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC38,11■■■■□ 3,69
Abca8bQ8K440 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC38,11■■■■□ 3,69
Abca8bQ8K440 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC38,09■■■■□ 3,69
Abca8bQ8K440 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC38,08■■■■□ 3,69
Abca8bQ8K440 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC38,07■■■■□ 3,68
Abca8bQ8K440 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC38,06■■■■□ 3,68
Abca8bQ8K440 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC38,05■■■■□ 3,68
Abca8bQ8K440 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC38,05■■■■□ 3,68
Abca8bQ8K440 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC38,05■■■■□ 3,68
Abca8bQ8K440 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC38,04■■■■□ 3,68
Abca8bQ8K440 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC38,02■■■■□ 3,68
Abca8bQ8K440 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC38,01■■■■□ 3,68
Abca8bQ8K440 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC38,01■■■■□ 3,68
Abca8bQ8K440 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC37,99■■■■□ 3,67
Abca8bQ8K440 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC37,99■■■■□ 3,67
Abca8bQ8K440 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC37,99■■■■□ 3,67
Abca8bQ8K440 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC37,98■■■■□ 3,67
Abca8bQ8K440 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC37,98■■■■□ 3,67
Abca8bQ8K440 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC37,98■■■■□ 3,67
Abca8bQ8K440 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC37,94■■■■□ 3,66
Abca8bQ8K440 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC37,94■■■■□ 3,66
Abca8bQ8K440 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC37,94■■■■□ 3,66
Abca8bQ8K440 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC37,94■■■■□ 3,66
Abca8bQ8K440 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC37,94■■■■□ 3,66
Retrieved 100 of 76,532 protein–RNA pairs in 18,1 ms