Protein–RNA interactions for Protein: Q8K297

Colgalt1, Procollagen galactosyltransferase 1, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colgalt1Q8K297 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Colgalt1Q8K297 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Colgalt1Q8K297 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Colgalt1Q8K297 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
Colgalt1Q8K297 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Colgalt1Q8K297 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Colgalt1Q8K297 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.03■■□□□ 1.92
Colgalt1Q8K297 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Colgalt1Q8K297 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.92
Colgalt1Q8K297 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Colgalt1Q8K297 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Colgalt1Q8K297 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Colgalt1Q8K297 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Colgalt1Q8K297 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Colgalt1Q8K297 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.96■■□□□ 1.91
Colgalt1Q8K297 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.96■■□□□ 1.91
Colgalt1Q8K297 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Colgalt1Q8K297 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Colgalt1Q8K297 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Colgalt1Q8K297 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.94■■□□□ 1.9
Colgalt1Q8K297 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.93■■□□□ 1.9
Colgalt1Q8K297 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Colgalt1Q8K297 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Colgalt1Q8K297 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.92■■□□□ 1.9
Colgalt1Q8K297 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Colgalt1Q8K297 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Colgalt1Q8K297 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Colgalt1Q8K297 Nkain2-201ENSMUST00000092602 558 ntBASIC26.89■■□□□ 1.9
Colgalt1Q8K297 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Colgalt1Q8K297 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Colgalt1Q8K297 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.87■■□□□ 1.89
Colgalt1Q8K297 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Colgalt1Q8K297 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Colgalt1Q8K297 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Colgalt1Q8K297 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Colgalt1Q8K297 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Colgalt1Q8K297 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Colgalt1Q8K297 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.85■■□□□ 1.89
Colgalt1Q8K297 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Colgalt1Q8K297 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Colgalt1Q8K297 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.83■■□□□ 1.89
Colgalt1Q8K297 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Colgalt1Q8K297 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Colgalt1Q8K297 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Colgalt1Q8K297 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Colgalt1Q8K297 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Colgalt1Q8K297 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Colgalt1Q8K297 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.8■■□□□ 1.88
Colgalt1Q8K297 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Colgalt1Q8K297 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
Colgalt1Q8K297 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Colgalt1Q8K297 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
Colgalt1Q8K297 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Colgalt1Q8K297 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.74■■□□□ 1.87
Colgalt1Q8K297 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Colgalt1Q8K297 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Colgalt1Q8K297 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.73■■□□□ 1.87
Colgalt1Q8K297 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Colgalt1Q8K297 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Colgalt1Q8K297 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Colgalt1Q8K297 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Colgalt1Q8K297 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Colgalt1Q8K297 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Colgalt1Q8K297 Gm7432-201ENSMUST00000210343 879 ntBASIC26.69■■□□□ 1.86
Colgalt1Q8K297 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Colgalt1Q8K297 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.65■■□□□ 1.86
Colgalt1Q8K297 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Colgalt1Q8K297 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Colgalt1Q8K297 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Colgalt1Q8K297 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Colgalt1Q8K297 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Colgalt1Q8K297 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
Colgalt1Q8K297 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.62■■□□□ 1.85
Colgalt1Q8K297 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Colgalt1Q8K297 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Colgalt1Q8K297 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Colgalt1Q8K297 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Colgalt1Q8K297 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Colgalt1Q8K297 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Colgalt1Q8K297 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Colgalt1Q8K297 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Colgalt1Q8K297 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.56■■□□□ 1.84
Colgalt1Q8K297 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Colgalt1Q8K297 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Colgalt1Q8K297 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Colgalt1Q8K297 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.54■■□□□ 1.84
Colgalt1Q8K297 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Colgalt1Q8K297 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
Colgalt1Q8K297 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Colgalt1Q8K297 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Colgalt1Q8K297 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Colgalt1Q8K297 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Colgalt1Q8K297 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Colgalt1Q8K297 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Colgalt1Q8K297 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.51■■□□□ 1.83
Colgalt1Q8K297 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Colgalt1Q8K297 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
Colgalt1Q8K297 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Colgalt1Q8K297 Gm11599-201ENSMUST00000118720 878 ntBASIC26.49■■□□□ 1.83
Colgalt1Q8K297 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms