Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trim61Q8JZK6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trim61Q8JZK6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Trim61Q8JZK6 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.36■■□□□ 1.81
Trim61Q8JZK6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim61Q8JZK6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Trim61Q8JZK6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim61Q8JZK6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim61Q8JZK6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim61Q8JZK6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim61Q8JZK6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim61Q8JZK6 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.3■■□□□ 1.8
Trim61Q8JZK6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.3■■□□□ 1.8
Trim61Q8JZK6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Trim61Q8JZK6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.28■■□□□ 1.8
Trim61Q8JZK6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Trim61Q8JZK6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim61Q8JZK6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim61Q8JZK6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim61Q8JZK6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim61Q8JZK6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.23■■□□□ 1.79
Trim61Q8JZK6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.22■■□□□ 1.79
Trim61Q8JZK6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim61Q8JZK6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim61Q8JZK6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Trim61Q8JZK6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
Trim61Q8JZK6 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.2■■□□□ 1.78
Trim61Q8JZK6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim61Q8JZK6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trim61Q8JZK6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.19■■□□□ 1.78
Trim61Q8JZK6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim61Q8JZK6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trim61Q8JZK6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.18■■□□□ 1.78
Trim61Q8JZK6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Trim61Q8JZK6 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.17■■□□□ 1.78
Trim61Q8JZK6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim61Q8JZK6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trim61Q8JZK6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Trim61Q8JZK6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Trim61Q8JZK6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
Trim61Q8JZK6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.12■■□□□ 1.77
Trim61Q8JZK6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim61Q8JZK6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trim61Q8JZK6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trim61Q8JZK6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Trim61Q8JZK6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim61Q8JZK6 Nkain2-201ENSMUST00000092602 558 ntBASIC26.08■■□□□ 1.77
Trim61Q8JZK6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim61Q8JZK6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trim61Q8JZK6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.07■■□□□ 1.76
Trim61Q8JZK6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Trim61Q8JZK6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Trim61Q8JZK6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Trim61Q8JZK6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim61Q8JZK6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim61Q8JZK6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Trim61Q8JZK6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim61Q8JZK6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trim61Q8JZK6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim61Q8JZK6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim61Q8JZK6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Trim61Q8JZK6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim61Q8JZK6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Trim61Q8JZK6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Trim61Q8JZK6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trim61Q8JZK6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trim61Q8JZK6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26■■□□□ 1.75
Trim61Q8JZK6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trim61Q8JZK6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trim61Q8JZK6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim61Q8JZK6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
Trim61Q8JZK6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim61Q8JZK6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trim61Q8JZK6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim61Q8JZK6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim61Q8JZK6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim61Q8JZK6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Trim61Q8JZK6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.92■■□□□ 1.74
Trim61Q8JZK6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Trim61Q8JZK6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Trim61Q8JZK6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.91■■□□□ 1.74
Trim61Q8JZK6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trim61Q8JZK6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trim61Q8JZK6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.9■■□□□ 1.74
Trim61Q8JZK6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.89■■□□□ 1.74
Trim61Q8JZK6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Trim61Q8JZK6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trim61Q8JZK6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Trim61Q8JZK6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim61Q8JZK6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim61Q8JZK6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Trim61Q8JZK6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim61Q8JZK6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim61Q8JZK6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.84■■□□□ 1.73
Trim61Q8JZK6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim61Q8JZK6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Trim61Q8JZK6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Trim61Q8JZK6 Gm7432-201ENSMUST00000210343 879 ntBASIC25.82■■□□□ 1.72
Trim61Q8JZK6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.81■■□□□ 1.72
Trim61Q8JZK6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms