Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Ccdc187Q8C5V8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Ccdc187Q8C5V8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Ccdc187Q8C5V8 Gm6821-201ENSMUST00000107540 542 ntBASIC25,48■■□□□ 1,67
Ccdc187Q8C5V8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25,48■■□□□ 1,67
Ccdc187Q8C5V8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Ccdc187Q8C5V8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25,46■■□□□ 1,67
Ccdc187Q8C5V8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Ccdc187Q8C5V8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25,45■■□□□ 1,67
Ccdc187Q8C5V8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25,45■■□□□ 1,67
Ccdc187Q8C5V8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25,45■■□□□ 1,66
Ccdc187Q8C5V8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25,45■■□□□ 1,66
Ccdc187Q8C5V8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25,45■■□□□ 1,66
Ccdc187Q8C5V8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25,45■■□□□ 1,66
Ccdc187Q8C5V8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Ccdc187Q8C5V8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Ccdc187Q8C5V8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25,43■■□□□ 1,66
Ccdc187Q8C5V8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25,43■■□□□ 1,66
Ccdc187Q8C5V8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25,42■■□□□ 1,66
Ccdc187Q8C5V8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Ccdc187Q8C5V8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Ccdc187Q8C5V8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25,39■■□□□ 1,66
Ccdc187Q8C5V8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,39■■□□□ 1,65
Ccdc187Q8C5V8 Gm42809-201ENSMUST00000198429 1138 ntBASIC25,38■■□□□ 1,65
Ccdc187Q8C5V8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Ccdc187Q8C5V8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25,37■■□□□ 1,65
Ccdc187Q8C5V8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25,36■■□□□ 1,65
Ccdc187Q8C5V8 Gm5987-201ENSMUST00000196433 1151 ntBASIC25,35■■□□□ 1,65
Ccdc187Q8C5V8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25,35■■□□□ 1,65
Ccdc187Q8C5V8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25,34■■□□□ 1,65
Ccdc187Q8C5V8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Ccdc187Q8C5V8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Ccdc187Q8C5V8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25,32■■□□□ 1,64
Ccdc187Q8C5V8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Ccdc187Q8C5V8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25,31■■□□□ 1,64
Ccdc187Q8C5V8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25,3■■□□□ 1,64
Ccdc187Q8C5V8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Ccdc187Q8C5V8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25,3■■□□□ 1,64
Ccdc187Q8C5V8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Ccdc187Q8C5V8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25,29■■□□□ 1,64
Ccdc187Q8C5V8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Ccdc187Q8C5V8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Ccdc187Q8C5V8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25,27■■□□□ 1,64
Ccdc187Q8C5V8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25,26■■□□□ 1,63
Ccdc187Q8C5V8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Ccdc187Q8C5V8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25,25■■□□□ 1,63
Ccdc187Q8C5V8 Nkain2-201ENSMUST00000092602 558 ntBASIC25,25■■□□□ 1,63
Ccdc187Q8C5V8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25,25■■□□□ 1,63
Ccdc187Q8C5V8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25,25■■□□□ 1,63
Ccdc187Q8C5V8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Ccdc187Q8C5V8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25,23■■□□□ 1,63
Ccdc187Q8C5V8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25,23■■□□□ 1,63
Ccdc187Q8C5V8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
Ccdc187Q8C5V8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25,22■■□□□ 1,63
Ccdc187Q8C5V8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25,22■■□□□ 1,63
Ccdc187Q8C5V8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25,22■■□□□ 1,63
Ccdc187Q8C5V8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25,2■■□□□ 1,62
Ccdc187Q8C5V8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25,2■■□□□ 1,62
Ccdc187Q8C5V8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25,19■■□□□ 1,62
Ccdc187Q8C5V8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25,19■■□□□ 1,62
Ccdc187Q8C5V8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25,18■■□□□ 1,62
Ccdc187Q8C5V8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25,17■■□□□ 1,62
Ccdc187Q8C5V8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25,17■■□□□ 1,62
Ccdc187Q8C5V8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Ccdc187Q8C5V8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Ccdc187Q8C5V8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25,15■■□□□ 1,62
Ccdc187Q8C5V8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25,15■■□□□ 1,62
Ccdc187Q8C5V8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25,15■■□□□ 1,62
Ccdc187Q8C5V8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25,15■■□□□ 1,62
Ccdc187Q8C5V8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25,14■■□□□ 1,62
Ccdc187Q8C5V8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25,14■■□□□ 1,62
Ccdc187Q8C5V8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Ccdc187Q8C5V8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25,12■■□□□ 1,61
Ccdc187Q8C5V8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Ccdc187Q8C5V8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25,11■■□□□ 1,61
Ccdc187Q8C5V8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Ccdc187Q8C5V8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25,1■■□□□ 1,61
Ccdc187Q8C5V8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Ccdc187Q8C5V8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Ccdc187Q8C5V8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25,06■■□□□ 1,6
Ccdc187Q8C5V8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25,05■■□□□ 1,6
Ccdc187Q8C5V8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25,05■■□□□ 1,6
Ccdc187Q8C5V8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25,05■■□□□ 1,6
Ccdc187Q8C5V8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25,04■■□□□ 1,6
Ccdc187Q8C5V8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Ccdc187Q8C5V8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Ccdc187Q8C5V8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Ccdc187Q8C5V8 Gm6345-201ENSMUST00000180378 1691 ntBASIC25,04■■□□□ 1,6
Ccdc187Q8C5V8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25,03■■□□□ 1,6
Ccdc187Q8C5V8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25,03■■□□□ 1,6
Ccdc187Q8C5V8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25,02■■□□□ 1,6
Ccdc187Q8C5V8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25■■□□□ 1,59
Ccdc187Q8C5V8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1,59
Ccdc187Q8C5V8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24,97■■□□□ 1,59
Ccdc187Q8C5V8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24,97■■□□□ 1,59
Ccdc187Q8C5V8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24,96■■□□□ 1,59
Ccdc187Q8C5V8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24,95■■□□□ 1,58
Ccdc187Q8C5V8 Gm7432-201ENSMUST00000210343 879 ntBASIC24,95■■□□□ 1,58
Ccdc187Q8C5V8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24,94■■□□□ 1,58
Ccdc187Q8C5V8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24,94■■□□□ 1,58
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms