Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Cps1Q8C196 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC35.11■■■■□ 3.21
Cps1Q8C196 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Cps1Q8C196 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC35.1■■■■□ 3.21
Cps1Q8C196 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
Cps1Q8C196 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Cps1Q8C196 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Cps1Q8C196 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Cps1Q8C196 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC35.06■■■■□ 3.2
Cps1Q8C196 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Cps1Q8C196 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC35.06■■■■□ 3.2
Cps1Q8C196 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Cps1Q8C196 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Cps1Q8C196 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Cps1Q8C196 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Cps1Q8C196 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC35.05■■■■□ 3.2
Cps1Q8C196 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC35.04■■■■□ 3.2
Cps1Q8C196 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Cps1Q8C196 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC35.03■■■■□ 3.2
Cps1Q8C196 Nkain2-201ENSMUST00000092602 558 ntBASIC35.03■■■■□ 3.2
Cps1Q8C196 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Cps1Q8C196 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Cps1Q8C196 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.19
Cps1Q8C196 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC35■■■■□ 3.19
Cps1Q8C196 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
Cps1Q8C196 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Cps1Q8C196 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC34.97■■■■□ 3.19
Cps1Q8C196 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Cps1Q8C196 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Cps1Q8C196 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Cps1Q8C196 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC34.91■■■■□ 3.18
Cps1Q8C196 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC34.91■■■■□ 3.18
Cps1Q8C196 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Cps1Q8C196 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Cps1Q8C196 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Cps1Q8C196 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Cps1Q8C196 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Cps1Q8C196 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Cps1Q8C196 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Cps1Q8C196 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
Cps1Q8C196 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Cps1Q8C196 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
Cps1Q8C196 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.16
Cps1Q8C196 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Cps1Q8C196 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Cps1Q8C196 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Cps1Q8C196 Gm2415-204ENSMUST00000190235 2004 ntBASIC34.76■■■■□ 3.16
Cps1Q8C196 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC34.76■■■■□ 3.16
Cps1Q8C196 Gm7432-201ENSMUST00000210343 879 ntBASIC34.76■■■■□ 3.15
Cps1Q8C196 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC34.74■■■■□ 3.15
Cps1Q8C196 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Cps1Q8C196 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Cps1Q8C196 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Cps1Q8C196 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC34.72■■■■□ 3.15
Cps1Q8C196 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Cps1Q8C196 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Cps1Q8C196 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
Cps1Q8C196 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC34.66■■■■□ 3.14
Cps1Q8C196 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Cps1Q8C196 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
Cps1Q8C196 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC34.63■■■■□ 3.13
Cps1Q8C196 Gm11599-201ENSMUST00000118720 878 ntBASIC34.62■■■■□ 3.13
Cps1Q8C196 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Cps1Q8C196 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC34.61■■■■□ 3.13
Cps1Q8C196 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC34.61■■■■□ 3.13
Cps1Q8C196 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC34.6■■■■□ 3.13
Cps1Q8C196 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Cps1Q8C196 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Cps1Q8C196 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC34.57■■■■□ 3.13
Cps1Q8C196 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Cps1Q8C196 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Cps1Q8C196 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC34.56■■■■□ 3.12
Cps1Q8C196 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Cps1Q8C196 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Cps1Q8C196 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Cps1Q8C196 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC34.53■■■■□ 3.12
Cps1Q8C196 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC34.53■■■■□ 3.12
Cps1Q8C196 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Cps1Q8C196 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Cps1Q8C196 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC34.52■■■■□ 3.12
Cps1Q8C196 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Cps1Q8C196 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC34.51■■■■□ 3.11
Cps1Q8C196 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC34.49■■■■□ 3.11
Cps1Q8C196 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC34.49■■■■□ 3.11
Cps1Q8C196 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
Cps1Q8C196 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Cps1Q8C196 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC34.47■■■■□ 3.11
Cps1Q8C196 Gm6658-202ENSMUST00000209493 1885 ntBASIC34.46■■■■□ 3.11
Cps1Q8C196 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC34.45■■■■□ 3.11
Cps1Q8C196 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC34.45■■■■□ 3.1
Cps1Q8C196 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC34.44■■■■□ 3.1
Cps1Q8C196 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Cps1Q8C196 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Cps1Q8C196 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
Cps1Q8C196 Gm11175-201ENSMUST00000116172 543 ntBASIC34.39■■■■□ 3.1
Cps1Q8C196 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Cps1Q8C196 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Cps1Q8C196 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC34.38■■■■□ 3.09
Cps1Q8C196 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Cps1Q8C196 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms