Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Scfd1Q8BRF7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Scfd1Q8BRF7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Scfd1Q8BRF7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Scfd1Q8BRF7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Scfd1Q8BRF7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Scfd1Q8BRF7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29■■■□□ 2.23
Scfd1Q8BRF7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Scfd1Q8BRF7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Scfd1Q8BRF7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Scfd1Q8BRF7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Scfd1Q8BRF7 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.96■■■□□ 2.23
Scfd1Q8BRF7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
Scfd1Q8BRF7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Scfd1Q8BRF7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Scfd1Q8BRF7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Scfd1Q8BRF7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Scfd1Q8BRF7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.9■■■□□ 2.22
Scfd1Q8BRF7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Scfd1Q8BRF7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Scfd1Q8BRF7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Scfd1Q8BRF7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.88■■■□□ 2.21
Scfd1Q8BRF7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scfd1Q8BRF7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.88■■■□□ 2.21
Scfd1Q8BRF7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scfd1Q8BRF7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Scfd1Q8BRF7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Scfd1Q8BRF7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.87■■■□□ 2.21
Scfd1Q8BRF7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.86■■■□□ 2.21
Scfd1Q8BRF7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Scfd1Q8BRF7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Scfd1Q8BRF7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Scfd1Q8BRF7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Scfd1Q8BRF7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Scfd1Q8BRF7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Scfd1Q8BRF7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Scfd1Q8BRF7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Scfd1Q8BRF7 Gm8503-201ENSMUST00000118131 455 ntBASIC28.8■■■□□ 2.2
Scfd1Q8BRF7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Scfd1Q8BRF7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Scfd1Q8BRF7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Scfd1Q8BRF7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Scfd1Q8BRF7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Scfd1Q8BRF7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Scfd1Q8BRF7 Gm6821-201ENSMUST00000107540 542 ntBASIC28.76■■■□□ 2.19
Scfd1Q8BRF7 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.74■■■□□ 2.19
Scfd1Q8BRF7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
Scfd1Q8BRF7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Scfd1Q8BRF7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Scfd1Q8BRF7 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.7■■■□□ 2.18
Scfd1Q8BRF7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.69■■■□□ 2.18
Scfd1Q8BRF7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Scfd1Q8BRF7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.67■■■□□ 2.18
Scfd1Q8BRF7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Scfd1Q8BRF7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Scfd1Q8BRF7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Scfd1Q8BRF7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.66■■■□□ 2.18
Scfd1Q8BRF7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Scfd1Q8BRF7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Scfd1Q8BRF7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Scfd1Q8BRF7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.64■■■□□ 2.17
Scfd1Q8BRF7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Scfd1Q8BRF7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Scfd1Q8BRF7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Scfd1Q8BRF7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.61■■■□□ 2.17
Scfd1Q8BRF7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Scfd1Q8BRF7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Scfd1Q8BRF7 Nkain2-201ENSMUST00000092602 558 ntBASIC28.6■■■□□ 2.17
Scfd1Q8BRF7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Scfd1Q8BRF7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.57■■■□□ 2.16
Scfd1Q8BRF7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Scfd1Q8BRF7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Scfd1Q8BRF7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.56■■■□□ 2.16
Scfd1Q8BRF7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.56■■■□□ 2.16
Scfd1Q8BRF7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Scfd1Q8BRF7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Scfd1Q8BRF7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
Scfd1Q8BRF7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
Scfd1Q8BRF7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Scfd1Q8BRF7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Scfd1Q8BRF7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.52■■■□□ 2.16
Scfd1Q8BRF7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Scfd1Q8BRF7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Scfd1Q8BRF7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Scfd1Q8BRF7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Scfd1Q8BRF7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.49■■■□□ 2.15
Scfd1Q8BRF7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Scfd1Q8BRF7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Scfd1Q8BRF7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Scfd1Q8BRF7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Scfd1Q8BRF7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.45■■■□□ 2.14
Scfd1Q8BRF7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Scfd1Q8BRF7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Scfd1Q8BRF7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Scfd1Q8BRF7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Scfd1Q8BRF7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms