Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nhlrc1Q8BR37 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nhlrc1Q8BR37 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.14■□□□□ 0.65
Nhlrc1Q8BR37 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nhlrc1Q8BR37 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nhlrc1Q8BR37 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.13■□□□□ 0.65
Nhlrc1Q8BR37 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Nhlrc1Q8BR37 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nhlrc1Q8BR37 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhlrc1Q8BR37 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhlrc1Q8BR37 Gm6821-201ENSMUST00000107540 542 ntBASIC19.11■□□□□ 0.65
Nhlrc1Q8BR37 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.11■□□□□ 0.65
Nhlrc1Q8BR37 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.11■□□□□ 0.65
Nhlrc1Q8BR37 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhlrc1Q8BR37 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhlrc1Q8BR37 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nhlrc1Q8BR37 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nhlrc1Q8BR37 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Nhlrc1Q8BR37 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.09■□□□□ 0.65
Nhlrc1Q8BR37 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nhlrc1Q8BR37 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Nhlrc1Q8BR37 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nhlrc1Q8BR37 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Nhlrc1Q8BR37 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nhlrc1Q8BR37 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nhlrc1Q8BR37 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.05■□□□□ 0.64
Nhlrc1Q8BR37 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nhlrc1Q8BR37 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nhlrc1Q8BR37 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nhlrc1Q8BR37 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.04■□□□□ 0.64
Nhlrc1Q8BR37 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nhlrc1Q8BR37 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.04■□□□□ 0.64
Nhlrc1Q8BR37 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nhlrc1Q8BR37 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.03■□□□□ 0.64
Nhlrc1Q8BR37 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nhlrc1Q8BR37 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nhlrc1Q8BR37 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.02■□□□□ 0.64
Nhlrc1Q8BR37 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nhlrc1Q8BR37 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nhlrc1Q8BR37 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.01■□□□□ 0.63
Nhlrc1Q8BR37 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nhlrc1Q8BR37 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Nhlrc1Q8BR37 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.98■□□□□ 0.63
Nhlrc1Q8BR37 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nhlrc1Q8BR37 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nhlrc1Q8BR37 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.97■□□□□ 0.63
Nhlrc1Q8BR37 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nhlrc1Q8BR37 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nhlrc1Q8BR37 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nhlrc1Q8BR37 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nhlrc1Q8BR37 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nhlrc1Q8BR37 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nhlrc1Q8BR37 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nhlrc1Q8BR37 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.94■□□□□ 0.62
Nhlrc1Q8BR37 Nkain2-201ENSMUST00000092602 558 ntBASIC18.94■□□□□ 0.62
Nhlrc1Q8BR37 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nhlrc1Q8BR37 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nhlrc1Q8BR37 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nhlrc1Q8BR37 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nhlrc1Q8BR37 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nhlrc1Q8BR37 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nhlrc1Q8BR37 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nhlrc1Q8BR37 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nhlrc1Q8BR37 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nhlrc1Q8BR37 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.91■□□□□ 0.62
Nhlrc1Q8BR37 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nhlrc1Q8BR37 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nhlrc1Q8BR37 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Nhlrc1Q8BR37 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nhlrc1Q8BR37 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nhlrc1Q8BR37 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nhlrc1Q8BR37 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.9■□□□□ 0.62
Nhlrc1Q8BR37 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nhlrc1Q8BR37 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhlrc1Q8BR37 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nhlrc1Q8BR37 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nhlrc1Q8BR37 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.87■□□□□ 0.61
Nhlrc1Q8BR37 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nhlrc1Q8BR37 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhlrc1Q8BR37 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nhlrc1Q8BR37 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhlrc1Q8BR37 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.86■□□□□ 0.61
Nhlrc1Q8BR37 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nhlrc1Q8BR37 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlrc1Q8BR37 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nhlrc1Q8BR37 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhlrc1Q8BR37 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.83■□□□□ 0.6
Nhlrc1Q8BR37 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nhlrc1Q8BR37 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nhlrc1Q8BR37 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlrc1Q8BR37 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Nhlrc1Q8BR37 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlrc1Q8BR37 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhlrc1Q8BR37 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhlrc1Q8BR37 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.81■□□□□ 0.6
Nhlrc1Q8BR37 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhlrc1Q8BR37 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nhlrc1Q8BR37 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.8■□□□□ 0.6
Nhlrc1Q8BR37 Gm7432-201ENSMUST00000210343 879 ntBASIC18.8■□□□□ 0.6
Nhlrc1Q8BR37 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms