Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Nod1Q8BHB0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nod1Q8BHB0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Nod1Q8BHB0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Nod1Q8BHB0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Nod1Q8BHB0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.46■■□□□ 1.83
Nod1Q8BHB0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Nod1Q8BHB0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.46■■□□□ 1.83
Nod1Q8BHB0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Nod1Q8BHB0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Nod1Q8BHB0 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.43■■□□□ 1.82
Nod1Q8BHB0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.43■■□□□ 1.82
Nod1Q8BHB0 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.43■■□□□ 1.82
Nod1Q8BHB0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Nod1Q8BHB0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Nod1Q8BHB0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Nod1Q8BHB0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Nod1Q8BHB0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Nod1Q8BHB0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Nod1Q8BHB0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Nod1Q8BHB0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Nod1Q8BHB0 Nkain2-201ENSMUST00000092602 558 ntBASIC26.37■■□□□ 1.81
Nod1Q8BHB0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nod1Q8BHB0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nod1Q8BHB0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.36■■□□□ 1.81
Nod1Q8BHB0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Nod1Q8BHB0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nod1Q8BHB0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Nod1Q8BHB0 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.35■■□□□ 1.81
Nod1Q8BHB0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nod1Q8BHB0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nod1Q8BHB0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nod1Q8BHB0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Nod1Q8BHB0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Nod1Q8BHB0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nod1Q8BHB0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nod1Q8BHB0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.28■■□□□ 1.8
Nod1Q8BHB0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nod1Q8BHB0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nod1Q8BHB0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nod1Q8BHB0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Nod1Q8BHB0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nod1Q8BHB0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nod1Q8BHB0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nod1Q8BHB0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.23■■□□□ 1.79
Nod1Q8BHB0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nod1Q8BHB0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nod1Q8BHB0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nod1Q8BHB0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.22■■□□□ 1.79
Nod1Q8BHB0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nod1Q8BHB0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.21■■□□□ 1.79
Nod1Q8BHB0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nod1Q8BHB0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Nod1Q8BHB0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nod1Q8BHB0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nod1Q8BHB0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nod1Q8BHB0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
Nod1Q8BHB0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Nod1Q8BHB0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nod1Q8BHB0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Nod1Q8BHB0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Nod1Q8BHB0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nod1Q8BHB0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nod1Q8BHB0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.78
Nod1Q8BHB0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Nod1Q8BHB0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Nod1Q8BHB0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.14■■□□□ 1.77
Nod1Q8BHB0 Gm7432-201ENSMUST00000210343 879 ntBASIC26.13■■□□□ 1.77
Nod1Q8BHB0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.13■■□□□ 1.77
Nod1Q8BHB0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
Nod1Q8BHB0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nod1Q8BHB0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nod1Q8BHB0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.07■■□□□ 1.76
Nod1Q8BHB0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Nod1Q8BHB0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.06■■□□□ 1.76
Nod1Q8BHB0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Nod1Q8BHB0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nod1Q8BHB0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nod1Q8BHB0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nod1Q8BHB0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nod1Q8BHB0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Nod1Q8BHB0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nod1Q8BHB0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.01■■□□□ 1.75
Nod1Q8BHB0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26■■□□□ 1.75
Nod1Q8BHB0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.99■■□□□ 1.75
Nod1Q8BHB0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nod1Q8BHB0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Nod1Q8BHB0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Nod1Q8BHB0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Nod1Q8BHB0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Nod1Q8BHB0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
Nod1Q8BHB0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Nod1Q8BHB0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Nod1Q8BHB0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Nod1Q8BHB0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Nod1Q8BHB0 Gm11599-201ENSMUST00000118720 878 ntBASIC25.93■■□□□ 1.74
Nod1Q8BHB0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Nod1Q8BHB0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nod1Q8BHB0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.9■■□□□ 1.74
Nod1Q8BHB0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms