Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
SpidrQ8BGX7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
SpidrQ8BGX7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.88■■■□□ 2.37
SpidrQ8BGX7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SpidrQ8BGX7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.86■■■□□ 2.37
SpidrQ8BGX7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SpidrQ8BGX7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
SpidrQ8BGX7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SpidrQ8BGX7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SpidrQ8BGX7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SpidrQ8BGX7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.82■■■□□ 2.36
SpidrQ8BGX7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SpidrQ8BGX7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.81■■■□□ 2.36
SpidrQ8BGX7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SpidrQ8BGX7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SpidrQ8BGX7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SpidrQ8BGX7 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.8■■■□□ 2.36
SpidrQ8BGX7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SpidrQ8BGX7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
SpidrQ8BGX7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SpidrQ8BGX7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.76■■■□□ 2.35
SpidrQ8BGX7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SpidrQ8BGX7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SpidrQ8BGX7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
SpidrQ8BGX7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
SpidrQ8BGX7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SpidrQ8BGX7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SpidrQ8BGX7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.7■■■□□ 2.35
SpidrQ8BGX7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SpidrQ8BGX7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SpidrQ8BGX7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SpidrQ8BGX7 Nkain2-201ENSMUST00000092602 558 ntBASIC29.68■■■□□ 2.34
SpidrQ8BGX7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SpidrQ8BGX7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SpidrQ8BGX7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
SpidrQ8BGX7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SpidrQ8BGX7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SpidrQ8BGX7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SpidrQ8BGX7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SpidrQ8BGX7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SpidrQ8BGX7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
SpidrQ8BGX7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SpidrQ8BGX7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SpidrQ8BGX7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
SpidrQ8BGX7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SpidrQ8BGX7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
SpidrQ8BGX7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SpidrQ8BGX7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.61■■■□□ 2.33
SpidrQ8BGX7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SpidrQ8BGX7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SpidrQ8BGX7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
SpidrQ8BGX7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SpidrQ8BGX7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SpidrQ8BGX7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SpidrQ8BGX7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SpidrQ8BGX7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.53■■■□□ 2.32
SpidrQ8BGX7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SpidrQ8BGX7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.51■■■□□ 2.31
SpidrQ8BGX7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SpidrQ8BGX7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SpidrQ8BGX7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
SpidrQ8BGX7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.49■■■□□ 2.31
SpidrQ8BGX7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.47■■■□□ 2.31
SpidrQ8BGX7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SpidrQ8BGX7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SpidrQ8BGX7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SpidrQ8BGX7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.44■■■□□ 2.3
SpidrQ8BGX7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SpidrQ8BGX7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SpidrQ8BGX7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SpidrQ8BGX7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SpidrQ8BGX7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SpidrQ8BGX7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SpidrQ8BGX7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.42■■■□□ 2.3
SpidrQ8BGX7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.42■■■□□ 2.3
SpidrQ8BGX7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
SpidrQ8BGX7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.39■■■□□ 2.3
SpidrQ8BGX7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
SpidrQ8BGX7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SpidrQ8BGX7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SpidrQ8BGX7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.36■■■□□ 2.29
SpidrQ8BGX7 Gm7432-201ENSMUST00000210343 879 ntBASIC29.36■■■□□ 2.29
SpidrQ8BGX7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SpidrQ8BGX7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SpidrQ8BGX7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
SpidrQ8BGX7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.33■■■□□ 2.29
SpidrQ8BGX7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.32■■■□□ 2.28
SpidrQ8BGX7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
SpidrQ8BGX7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SpidrQ8BGX7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
SpidrQ8BGX7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.31■■■□□ 2.28
SpidrQ8BGX7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.29■■■□□ 2.28
SpidrQ8BGX7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SpidrQ8BGX7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
SpidrQ8BGX7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
SpidrQ8BGX7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SpidrQ8BGX7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SpidrQ8BGX7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.23■■■□□ 2.27
SpidrQ8BGX7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SpidrQ8BGX7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms