Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29,89■■■□□ 2,37
SpidrQ8BGX7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29,88■■■□□ 2,37
SpidrQ8BGX7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29,88■■■□□ 2,37
SpidrQ8BGX7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
SpidrQ8BGX7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29,86■■■□□ 2,37
SpidrQ8BGX7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29,85■■■□□ 2,37
SpidrQ8BGX7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,85■■■□□ 2,37
SpidrQ8BGX7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29,83■■■□□ 2,37
SpidrQ8BGX7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29,83■■■□□ 2,37
SpidrQ8BGX7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29,83■■■□□ 2,37
SpidrQ8BGX7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29,82■■■□□ 2,36
SpidrQ8BGX7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
SpidrQ8BGX7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29,81■■■□□ 2,36
SpidrQ8BGX7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
SpidrQ8BGX7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29,81■■■□□ 2,36
SpidrQ8BGX7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,8■■■□□ 2,36
SpidrQ8BGX7 Gm6658-202ENSMUST00000209493 1885 ntBASIC29,8■■■□□ 2,36
SpidrQ8BGX7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29,77■■■□□ 2,36
SpidrQ8BGX7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29,77■■■□□ 2,36
SpidrQ8BGX7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29,77■■■□□ 2,36
SpidrQ8BGX7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29,76■■■□□ 2,35
SpidrQ8BGX7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
SpidrQ8BGX7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29,74■■■□□ 2,35
SpidrQ8BGX7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29,73■■■□□ 2,35
SpidrQ8BGX7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29,73■■■□□ 2,35
SpidrQ8BGX7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
SpidrQ8BGX7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29,71■■■□□ 2,35
SpidrQ8BGX7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29,7■■■□□ 2,35
SpidrQ8BGX7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,34
SpidrQ8BGX7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,34
SpidrQ8BGX7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29,68■■■□□ 2,34
SpidrQ8BGX7 Nkain2-201ENSMUST00000092602 558 ntBASIC29,68■■■□□ 2,34
SpidrQ8BGX7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29,68■■■□□ 2,34
SpidrQ8BGX7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29,67■■■□□ 2,34
SpidrQ8BGX7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29,66■■■□□ 2,34
SpidrQ8BGX7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29,66■■■□□ 2,34
SpidrQ8BGX7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
SpidrQ8BGX7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
SpidrQ8BGX7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
SpidrQ8BGX7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
SpidrQ8BGX7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29,66■■■□□ 2,34
SpidrQ8BGX7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
SpidrQ8BGX7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
SpidrQ8BGX7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29,65■■■□□ 2,34
SpidrQ8BGX7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29,63■■■□□ 2,33
SpidrQ8BGX7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29,63■■■□□ 2,33
SpidrQ8BGX7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29,61■■■□□ 2,33
SpidrQ8BGX7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29,61■■■□□ 2,33
SpidrQ8BGX7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
SpidrQ8BGX7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29,6■■■□□ 2,33
SpidrQ8BGX7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29,59■■■□□ 2,33
SpidrQ8BGX7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29,59■■■□□ 2,33
SpidrQ8BGX7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
SpidrQ8BGX7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
SpidrQ8BGX7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
SpidrQ8BGX7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29,53■■■□□ 2,32
SpidrQ8BGX7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
SpidrQ8BGX7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29,51■■■□□ 2,31
SpidrQ8BGX7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29,5■■■□□ 2,31
SpidrQ8BGX7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29,5■■■□□ 2,31
SpidrQ8BGX7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29,5■■■□□ 2,31
SpidrQ8BGX7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29,49■■■□□ 2,31
SpidrQ8BGX7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29,47■■■□□ 2,31
SpidrQ8BGX7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29,47■■■□□ 2,31
SpidrQ8BGX7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
SpidrQ8BGX7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29,45■■■□□ 2,31
SpidrQ8BGX7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29,44■■■□□ 2,3
SpidrQ8BGX7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29,43■■■□□ 2,3
SpidrQ8BGX7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29,43■■■□□ 2,3
SpidrQ8BGX7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29,43■■■□□ 2,3
SpidrQ8BGX7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29,42■■■□□ 2,3
SpidrQ8BGX7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29,42■■■□□ 2,3
SpidrQ8BGX7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29,42■■■□□ 2,3
SpidrQ8BGX7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29,42■■■□□ 2,3
SpidrQ8BGX7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29,42■■■□□ 2,3
SpidrQ8BGX7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29,41■■■□□ 2,3
SpidrQ8BGX7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29,39■■■□□ 2,3
SpidrQ8BGX7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29,39■■■□□ 2,3
SpidrQ8BGX7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29,38■■■□□ 2,29
SpidrQ8BGX7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29,37■■■□□ 2,29
SpidrQ8BGX7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29,36■■■□□ 2,29
SpidrQ8BGX7 Gm7432-201ENSMUST00000210343 879 ntBASIC29,36■■■□□ 2,29
SpidrQ8BGX7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29,36■■■□□ 2,29
SpidrQ8BGX7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29,35■■■□□ 2,29
SpidrQ8BGX7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29,34■■■□□ 2,29
SpidrQ8BGX7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29,33■■■□□ 2,29
SpidrQ8BGX7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29,32■■■□□ 2,28
SpidrQ8BGX7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29,31■■■□□ 2,28
SpidrQ8BGX7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29,31■■■□□ 2,28
SpidrQ8BGX7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29,31■■■□□ 2,28
SpidrQ8BGX7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29,31■■■□□ 2,28
SpidrQ8BGX7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29,29■■■□□ 2,28
SpidrQ8BGX7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29,28■■■□□ 2,28
SpidrQ8BGX7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29,27■■■□□ 2,28
SpidrQ8BGX7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29,27■■■□□ 2,28
SpidrQ8BGX7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29,25■■■□□ 2,27
SpidrQ8BGX7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
SpidrQ8BGX7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29,23■■■□□ 2,27
SpidrQ8BGX7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29,22■■■□□ 2,27
SpidrQ8BGX7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29,21■■■□□ 2,27
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms