Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ddx42Q810A7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx42Q810A7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx42Q810A7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
Ddx42Q810A7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx42Q810A7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx42Q810A7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
Ddx42Q810A7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx42Q810A7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx42Q810A7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx42Q810A7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Ddx42Q810A7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Ddx42Q810A7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx42Q810A7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.56■■□□□ 1.52
Ddx42Q810A7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
Ddx42Q810A7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx42Q810A7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx42Q810A7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx42Q810A7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.53■■□□□ 1.52
Ddx42Q810A7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx42Q810A7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx42Q810A7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx42Q810A7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx42Q810A7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx42Q810A7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Ddx42Q810A7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx42Q810A7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx42Q810A7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx42Q810A7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx42Q810A7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx42Q810A7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.48■■□□□ 1.51
Ddx42Q810A7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Ddx42Q810A7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx42Q810A7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx42Q810A7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx42Q810A7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx42Q810A7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx42Q810A7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx42Q810A7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx42Q810A7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx42Q810A7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx42Q810A7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
Ddx42Q810A7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx42Q810A7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx42Q810A7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Ddx42Q810A7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx42Q810A7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx42Q810A7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx42Q810A7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.39■■□□□ 1.5
Ddx42Q810A7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx42Q810A7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.39■■□□□ 1.49
Ddx42Q810A7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ddx42Q810A7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Ddx42Q810A7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx42Q810A7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx42Q810A7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Ddx42Q810A7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx42Q810A7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx42Q810A7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx42Q810A7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx42Q810A7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Ddx42Q810A7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx42Q810A7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.36■■□□□ 1.49
Ddx42Q810A7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx42Q810A7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx42Q810A7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx42Q810A7 Gm45855-201ENSMUST00000212546 880 ntBASIC24.34■■□□□ 1.49
Ddx42Q810A7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx42Q810A7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Ddx42Q810A7 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.33■■□□□ 1.49
Ddx42Q810A7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.33■■□□□ 1.48
Ddx42Q810A7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.32■■□□□ 1.48
Ddx42Q810A7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx42Q810A7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Ddx42Q810A7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx42Q810A7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.29■■□□□ 1.48
Ddx42Q810A7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx42Q810A7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx42Q810A7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ddx42Q810A7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Ddx42Q810A7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Ddx42Q810A7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Ddx42Q810A7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx42Q810A7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx42Q810A7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Ddx42Q810A7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx42Q810A7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx42Q810A7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx42Q810A7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx42Q810A7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx42Q810A7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx42Q810A7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx42Q810A7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx42Q810A7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx42Q810A7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Ddx42Q810A7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx42Q810A7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx42Q810A7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx42Q810A7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ddx42Q810A7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms