Protein–RNA interactions for Protein: Q6P9P0

Slf2, SMC5-SMC6 complex localization factor protein 2, mousemouse

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf2Q6P9P0 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.56■■■□□ 2.64
Slf2Q6P9P0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
Slf2Q6P9P0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.56■■■□□ 2.64
Slf2Q6P9P0 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.54■■■□□ 2.64
Slf2Q6P9P0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.54■■■□□ 2.64
Slf2Q6P9P0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.54■■■□□ 2.64
Slf2Q6P9P0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.53■■■□□ 2.64
Slf2Q6P9P0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Slf2Q6P9P0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
Slf2Q6P9P0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Slf2Q6P9P0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Slf2Q6P9P0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Slf2Q6P9P0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Slf2Q6P9P0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Slf2Q6P9P0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Slf2Q6P9P0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Slf2Q6P9P0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Slf2Q6P9P0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.44■■■□□ 2.62
Slf2Q6P9P0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Slf2Q6P9P0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Slf2Q6P9P0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Slf2Q6P9P0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Slf2Q6P9P0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Slf2Q6P9P0 Nkain2-201ENSMUST00000092602 558 ntBASIC31.42■■■□□ 2.62
Slf2Q6P9P0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Slf2Q6P9P0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Slf2Q6P9P0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.37■■■□□ 2.61
Slf2Q6P9P0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Slf2Q6P9P0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Slf2Q6P9P0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Slf2Q6P9P0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Slf2Q6P9P0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Slf2Q6P9P0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.34■■■□□ 2.61
Slf2Q6P9P0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Slf2Q6P9P0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Slf2Q6P9P0 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.31■■■□□ 2.6
Slf2Q6P9P0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Slf2Q6P9P0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Slf2Q6P9P0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Slf2Q6P9P0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.29■■■□□ 2.6
Slf2Q6P9P0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Slf2Q6P9P0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Slf2Q6P9P0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Slf2Q6P9P0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Slf2Q6P9P0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Slf2Q6P9P0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
Slf2Q6P9P0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Slf2Q6P9P0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Slf2Q6P9P0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Slf2Q6P9P0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.23■■■□□ 2.59
Slf2Q6P9P0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Slf2Q6P9P0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Slf2Q6P9P0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Slf2Q6P9P0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.2■■■□□ 2.58
Slf2Q6P9P0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Slf2Q6P9P0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Slf2Q6P9P0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.17■■■□□ 2.58
Slf2Q6P9P0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Slf2Q6P9P0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Slf2Q6P9P0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Slf2Q6P9P0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Slf2Q6P9P0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Slf2Q6P9P0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.15■■■□□ 2.58
Slf2Q6P9P0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Slf2Q6P9P0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Slf2Q6P9P0 Gm7432-201ENSMUST00000210343 879 ntBASIC31.13■■■□□ 2.57
Slf2Q6P9P0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Slf2Q6P9P0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slf2Q6P9P0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
Slf2Q6P9P0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Slf2Q6P9P0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Slf2Q6P9P0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.07■■■□□ 2.56
Slf2Q6P9P0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Slf2Q6P9P0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Slf2Q6P9P0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.03■■■□□ 2.56
Slf2Q6P9P0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Slf2Q6P9P0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.02■■■□□ 2.56
Slf2Q6P9P0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
Slf2Q6P9P0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
Slf2Q6P9P0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31■■■□□ 2.55
Slf2Q6P9P0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Slf2Q6P9P0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Slf2Q6P9P0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Slf2Q6P9P0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Slf2Q6P9P0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Slf2Q6P9P0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Slf2Q6P9P0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Slf2Q6P9P0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.54
Slf2Q6P9P0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Slf2Q6P9P0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Slf2Q6P9P0 Gm11599-201ENSMUST00000118720 878 ntBASIC30.9■■■□□ 2.54
Slf2Q6P9P0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Slf2Q6P9P0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Slf2Q6P9P0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Slf2Q6P9P0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.87■■■□□ 2.53
Slf2Q6P9P0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.85■■■□□ 2.53
Slf2Q6P9P0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Slf2Q6P9P0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.84■■■□□ 2.53
Slf2Q6P9P0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.84■■■□□ 2.53
Slf2Q6P9P0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms