Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.7■■■□□ 2.5
Ltn1Q6A009 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ltn1Q6A009 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.67■■■□□ 2.5
Ltn1Q6A009 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ltn1Q6A009 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ltn1Q6A009 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Ltn1Q6A009 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Ltn1Q6A009 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.64■■■□□ 2.5
Ltn1Q6A009 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ltn1Q6A009 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ltn1Q6A009 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.63■■■□□ 2.49
Ltn1Q6A009 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.61■■■□□ 2.49
Ltn1Q6A009 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Ltn1Q6A009 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
Ltn1Q6A009 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ltn1Q6A009 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ltn1Q6A009 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Ltn1Q6A009 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ltn1Q6A009 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.56■■■□□ 2.48
Ltn1Q6A009 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Ltn1Q6A009 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.56■■■□□ 2.48
Ltn1Q6A009 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.55■■■□□ 2.48
Ltn1Q6A009 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ltn1Q6A009 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ltn1Q6A009 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ltn1Q6A009 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ltn1Q6A009 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ltn1Q6A009 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Ltn1Q6A009 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.51■■■□□ 2.48
Ltn1Q6A009 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.48
Ltn1Q6A009 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ltn1Q6A009 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.49■■■□□ 2.47
Ltn1Q6A009 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ltn1Q6A009 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ltn1Q6A009 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.48■■■□□ 2.47
Ltn1Q6A009 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ltn1Q6A009 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ltn1Q6A009 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ltn1Q6A009 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ltn1Q6A009 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.44■■■□□ 2.46
Ltn1Q6A009 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ltn1Q6A009 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ltn1Q6A009 Nkain2-201ENSMUST00000092602 558 ntBASIC30.43■■■□□ 2.46
Ltn1Q6A009 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ltn1Q6A009 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ltn1Q6A009 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ltn1Q6A009 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ltn1Q6A009 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
Ltn1Q6A009 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.4■■■□□ 2.46
Ltn1Q6A009 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ltn1Q6A009 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Ltn1Q6A009 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ltn1Q6A009 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ltn1Q6A009 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ltn1Q6A009 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ltn1Q6A009 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Ltn1Q6A009 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ltn1Q6A009 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ltn1Q6A009 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ltn1Q6A009 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ltn1Q6A009 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.27■■■□□ 2.44
Ltn1Q6A009 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ltn1Q6A009 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.25■■■□□ 2.43
Ltn1Q6A009 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Ltn1Q6A009 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Ltn1Q6A009 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.23■■■□□ 2.43
Ltn1Q6A009 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.23■■■□□ 2.43
Ltn1Q6A009 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.23■■■□□ 2.43
Ltn1Q6A009 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ltn1Q6A009 Gm7432-201ENSMUST00000210343 879 ntBASIC30.21■■■□□ 2.43
Ltn1Q6A009 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ltn1Q6A009 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.2■■■□□ 2.42
Ltn1Q6A009 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ltn1Q6A009 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ltn1Q6A009 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ltn1Q6A009 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ltn1Q6A009 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.16■■■□□ 2.42
Ltn1Q6A009 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Ltn1Q6A009 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.15■■■□□ 2.42
Ltn1Q6A009 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ltn1Q6A009 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ltn1Q6A009 Gm11599-201ENSMUST00000118720 878 ntBASIC30.13■■■□□ 2.41
Ltn1Q6A009 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ltn1Q6A009 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ltn1Q6A009 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Ltn1Q6A009 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ltn1Q6A009 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ltn1Q6A009 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ltn1Q6A009 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.1■■■□□ 2.41
Ltn1Q6A009 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Ltn1Q6A009 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.1■■■□□ 2.41
Ltn1Q6A009 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ltn1Q6A009 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ltn1Q6A009 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.08■■■□□ 2.41
Ltn1Q6A009 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.06■■■□□ 2.4
Ltn1Q6A009 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ltn1Q6A009 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.05■■■□□ 2.4
Ltn1Q6A009 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Ltn1Q6A009 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.04■■■□□ 2.4
Ltn1Q6A009 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms