Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
Clcn1Q64347 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.02■■■□□ 2.72
Clcn1Q64347 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Clcn1Q64347 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Clcn1Q64347 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
Clcn1Q64347 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Clcn1Q64347 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Clcn1Q64347 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Clcn1Q64347 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.97■■■□□ 2.71
Clcn1Q64347 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Clcn1Q64347 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Clcn1Q64347 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.95■■■□□ 2.71
Clcn1Q64347 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Clcn1Q64347 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
Clcn1Q64347 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Clcn1Q64347 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Clcn1Q64347 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.92■■■□□ 2.7
Clcn1Q64347 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
Clcn1Q64347 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.89■■■□□ 2.7
Clcn1Q64347 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.89■■■□□ 2.7
Clcn1Q64347 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
Clcn1Q64347 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Clcn1Q64347 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Clcn1Q64347 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.86■■■□□ 2.69
Clcn1Q64347 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Clcn1Q64347 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.81■■■□□ 2.68
Clcn1Q64347 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Clcn1Q64347 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Clcn1Q64347 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Clcn1Q64347 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.79■■■□□ 2.68
Clcn1Q64347 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
Clcn1Q64347 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Clcn1Q64347 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.78■■■□□ 2.68
Clcn1Q64347 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Clcn1Q64347 Nkain2-201ENSMUST00000092602 558 ntBASIC31.77■■■□□ 2.68
Clcn1Q64347 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
Clcn1Q64347 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Clcn1Q64347 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Clcn1Q64347 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Clcn1Q64347 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.74■■■□□ 2.67
Clcn1Q64347 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Clcn1Q64347 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Clcn1Q64347 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Clcn1Q64347 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.7■■■□□ 2.67
Clcn1Q64347 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Clcn1Q64347 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.7■■■□□ 2.66
Clcn1Q64347 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Clcn1Q64347 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Clcn1Q64347 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Clcn1Q64347 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Clcn1Q64347 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Clcn1Q64347 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Clcn1Q64347 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.66■■■□□ 2.66
Clcn1Q64347 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Clcn1Q64347 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.65■■■□□ 2.66
Clcn1Q64347 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.64■■■□□ 2.66
Clcn1Q64347 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
Clcn1Q64347 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Clcn1Q64347 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Clcn1Q64347 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Clcn1Q64347 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Clcn1Q64347 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Clcn1Q64347 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
Clcn1Q64347 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Clcn1Q64347 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Clcn1Q64347 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Clcn1Q64347 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Clcn1Q64347 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Clcn1Q64347 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.57■■■□□ 2.64
Clcn1Q64347 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Clcn1Q64347 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Clcn1Q64347 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Clcn1Q64347 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Clcn1Q64347 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.48■■■□□ 2.63
Clcn1Q64347 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Clcn1Q64347 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Clcn1Q64347 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.46■■■□□ 2.63
Clcn1Q64347 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Clcn1Q64347 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Clcn1Q64347 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Clcn1Q64347 Gm7432-201ENSMUST00000210343 879 ntBASIC31.43■■■□□ 2.62
Clcn1Q64347 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
Clcn1Q64347 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.41■■■□□ 2.62
Clcn1Q64347 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Clcn1Q64347 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Clcn1Q64347 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.38■■■□□ 2.61
Clcn1Q64347 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.38■■■□□ 2.61
Clcn1Q64347 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Clcn1Q64347 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Clcn1Q64347 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Clcn1Q64347 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Clcn1Q64347 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.35■■■□□ 2.61
Clcn1Q64347 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Clcn1Q64347 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Clcn1Q64347 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Clcn1Q64347 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Clcn1Q64347 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Clcn1Q64347 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Clcn1Q64347 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Clcn1Q64347 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.31■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms