Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01559Q495D7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01559Q495D7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.74■□□□□ 0.75
LINC01559Q495D7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LINC01559Q495D7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC01559Q495D7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC01559Q495D7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01559Q495D7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01559Q495D7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC01559Q495D7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01559Q495D7 ZNRF2P1-201ENST00000441407 443 ntBASIC19.72■□□□□ 0.75
LINC01559Q495D7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
LINC01559Q495D7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
LINC01559Q495D7 AL135925.1-201ENST00000605920 1701 ntBASIC19.71■□□□□ 0.75
LINC01559Q495D7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01559Q495D7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01559Q495D7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01559Q495D7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01559Q495D7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01559Q495D7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01559Q495D7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC01559Q495D7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC01559Q495D7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01559Q495D7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01559Q495D7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LINC01559Q495D7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01559Q495D7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01559Q495D7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01559Q495D7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01559Q495D7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01559Q495D7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01559Q495D7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LINC01559Q495D7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01559Q495D7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01559Q495D7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01559Q495D7 AC142086.6-201ENST00000621154 1765 ntBASIC19.65■□□□□ 0.74
LINC01559Q495D7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.65■□□□□ 0.74
LINC01559Q495D7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01559Q495D7 DYNLL1-208ENST00000550178 581 ntBASIC19.64■□□□□ 0.73
LINC01559Q495D7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01559Q495D7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LINC01559Q495D7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01559Q495D7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01559Q495D7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01559Q495D7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LINC01559Q495D7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01559Q495D7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01559Q495D7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01559Q495D7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01559Q495D7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LINC01559Q495D7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01559Q495D7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01559Q495D7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01559Q495D7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01559Q495D7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LINC01559Q495D7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01559Q495D7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.59■□□□□ 0.73
LINC01559Q495D7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01559Q495D7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LINC01559Q495D7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01559Q495D7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.58■□□□□ 0.72
LINC01559Q495D7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01559Q495D7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01559Q495D7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC01559Q495D7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01559Q495D7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LINC01559Q495D7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01559Q495D7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01559Q495D7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01559Q495D7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01559Q495D7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.55■□□□□ 0.72
LINC01559Q495D7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LINC01559Q495D7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.54■□□□□ 0.72
LINC01559Q495D7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01559Q495D7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01559Q495D7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01559Q495D7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LINC01559Q495D7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01559Q495D7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01559Q495D7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01559Q495D7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01559Q495D7 AL031258.1-201ENST00000623562 325 ntBASIC19.52■□□□□ 0.72
LINC01559Q495D7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01559Q495D7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01559Q495D7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01559Q495D7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01559Q495D7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.51■□□□□ 0.71
LINC01559Q495D7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01559Q495D7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01559Q495D7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01559Q495D7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC01559Q495D7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01559Q495D7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.48■□□□□ 0.71
LINC01559Q495D7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01559Q495D7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LINC01559Q495D7 AL139393.2-201ENST00000608721 2025 ntBASIC19.47■□□□□ 0.71
LINC01559Q495D7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LINC01559Q495D7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01559Q495D7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01559Q495D7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms