Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.38■■□□□ 1.33
Cacna1aP97445 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.37■■□□□ 1.33
Cacna1aP97445 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.37■■□□□ 1.33
Cacna1aP97445 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
Cacna1aP97445 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cacna1aP97445 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.37■■□□□ 1.33
Cacna1aP97445 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.36■■□□□ 1.33
Cacna1aP97445 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cacna1aP97445 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.36■■□□□ 1.33
Cacna1aP97445 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cacna1aP97445 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cacna1aP97445 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.34■■□□□ 1.33
Cacna1aP97445 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cacna1aP97445 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cacna1aP97445 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cacna1aP97445 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Cacna1aP97445 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cacna1aP97445 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cacna1aP97445 Cap2-205ENSMUST00000225824 1634 ntBASIC23.32■■□□□ 1.32
Cacna1aP97445 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cacna1aP97445 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cacna1aP97445 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.31■■□□□ 1.32
Cacna1aP97445 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cacna1aP97445 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cacna1aP97445 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cacna1aP97445 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cacna1aP97445 Gm11175-201ENSMUST00000116172 543 ntBASIC23.29■■□□□ 1.32
Cacna1aP97445 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cacna1aP97445 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cacna1aP97445 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cacna1aP97445 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.28■■□□□ 1.32
Cacna1aP97445 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cacna1aP97445 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.27■■□□□ 1.32
Cacna1aP97445 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Cacna1aP97445 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cacna1aP97445 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cacna1aP97445 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.25■■□□□ 1.31
Cacna1aP97445 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cacna1aP97445 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cacna1aP97445 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cacna1aP97445 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cacna1aP97445 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cacna1aP97445 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cacna1aP97445 Gm11599-201ENSMUST00000118720 878 ntBASIC23.2■■□□□ 1.3
Cacna1aP97445 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cacna1aP97445 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cacna1aP97445 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cacna1aP97445 Nkain2-201ENSMUST00000092602 558 ntBASIC23.18■■□□□ 1.3
Cacna1aP97445 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cacna1aP97445 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Cacna1aP97445 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cacna1aP97445 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cacna1aP97445 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cacna1aP97445 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cacna1aP97445 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cacna1aP97445 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cacna1aP97445 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cacna1aP97445 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
Cacna1aP97445 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cacna1aP97445 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cacna1aP97445 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cacna1aP97445 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
Cacna1aP97445 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cacna1aP97445 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cacna1aP97445 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cacna1aP97445 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cacna1aP97445 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Cacna1aP97445 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cacna1aP97445 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cacna1aP97445 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cacna1aP97445 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cacna1aP97445 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cacna1aP97445 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cacna1aP97445 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cacna1aP97445 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cacna1aP97445 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Cacna1aP97445 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cacna1aP97445 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cacna1aP97445 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cacna1aP97445 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cacna1aP97445 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cacna1aP97445 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cacna1aP97445 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cacna1aP97445 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cacna1aP97445 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cacna1aP97445 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
Cacna1aP97445 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cacna1aP97445 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cacna1aP97445 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.02■■□□□ 1.27
Cacna1aP97445 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cacna1aP97445 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.01■■□□□ 1.27
Cacna1aP97445 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23■■□□□ 1.27
Cacna1aP97445 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.99■■□□□ 1.27
Cacna1aP97445 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cacna1aP97445 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cacna1aP97445 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.99■■□□□ 1.27
Cacna1aP97445 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Cacna1aP97445 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cacna1aP97445 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cacna1aP97445 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms