Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ybx1P62960 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ybx1P62960 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ybx1P62960 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Ybx1P62960 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ybx1P62960 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.89■■□□□ 1.74
Ybx1P62960 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Ybx1P62960 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Ybx1P62960 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.88■■□□□ 1.73
Ybx1P62960 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ybx1P62960 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ybx1P62960 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
Ybx1P62960 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ybx1P62960 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.85■■□□□ 1.73
Ybx1P62960 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.85■■□□□ 1.73
Ybx1P62960 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ybx1P62960 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Ybx1P62960 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Ybx1P62960 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.81■■□□□ 1.72
Ybx1P62960 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ybx1P62960 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ybx1P62960 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.8■■□□□ 1.72
Ybx1P62960 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.8■■□□□ 1.72
Ybx1P62960 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.79■■□□□ 1.72
Ybx1P62960 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.78■■□□□ 1.72
Ybx1P62960 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ybx1P62960 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ybx1P62960 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ybx1P62960 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.75■■□□□ 1.71
Ybx1P62960 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ybx1P62960 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ybx1P62960 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.74■■□□□ 1.71
Ybx1P62960 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ybx1P62960 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ybx1P62960 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Ybx1P62960 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ybx1P62960 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ybx1P62960 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ybx1P62960 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ybx1P62960 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ybx1P62960 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ybx1P62960 Nkain2-201ENSMUST00000092602 558 ntBASIC25.69■■□□□ 1.7
Ybx1P62960 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Ybx1P62960 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ybx1P62960 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ybx1P62960 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.66■■□□□ 1.7
Ybx1P62960 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ybx1P62960 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ybx1P62960 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ybx1P62960 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.65■■□□□ 1.7
Ybx1P62960 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ybx1P62960 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ybx1P62960 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ybx1P62960 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Ybx1P62960 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ybx1P62960 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ybx1P62960 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.6■■□□□ 1.69
Ybx1P62960 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ybx1P62960 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ybx1P62960 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ybx1P62960 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ybx1P62960 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Ybx1P62960 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ybx1P62960 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ybx1P62960 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.57■■□□□ 1.68
Ybx1P62960 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
Ybx1P62960 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ybx1P62960 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ybx1P62960 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.56■■□□□ 1.68
Ybx1P62960 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ybx1P62960 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ybx1P62960 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Ybx1P62960 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.53■■□□□ 1.68
Ybx1P62960 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ybx1P62960 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Ybx1P62960 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ybx1P62960 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ybx1P62960 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ybx1P62960 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Ybx1P62960 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.48■■□□□ 1.67
Ybx1P62960 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ybx1P62960 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ybx1P62960 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ybx1P62960 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ybx1P62960 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ybx1P62960 Gm7432-201ENSMUST00000210343 879 ntBASIC25.42■■□□□ 1.66
Ybx1P62960 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.41■■□□□ 1.66
Ybx1P62960 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
Ybx1P62960 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ybx1P62960 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.39■■□□□ 1.66
Ybx1P62960 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ybx1P62960 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ybx1P62960 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ybx1P62960 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Ybx1P62960 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.38■■□□□ 1.65
Ybx1P62960 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ybx1P62960 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ybx1P62960 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ybx1P62960 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ybx1P62960 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.35■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms