Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Best1O88870 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,5
Best1O88870 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24,38■■□□□ 1,49
Best1O88870 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24,38■■□□□ 1,49
Best1O88870 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24,38■■□□□ 1,49
Best1O88870 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24,37■■□□□ 1,49
Best1O88870 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Best1O88870 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24,36■■□□□ 1,49
Best1O88870 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24,36■■□□□ 1,49
Best1O88870 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24,35■■□□□ 1,49
Best1O88870 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24,35■■□□□ 1,49
Best1O88870 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24,35■■□□□ 1,49
Best1O88870 Gm6345-201ENSMUST00000180378 1691 ntBASIC24,35■■□□□ 1,49
Best1O88870 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24,35■■□□□ 1,49
Best1O88870 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24,35■■□□□ 1,49
Best1O88870 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Best1O88870 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24,33■■□□□ 1,49
Best1O88870 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24,33■■□□□ 1,49
Best1O88870 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24,32■■□□□ 1,48
Best1O88870 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24,31■■□□□ 1,48
Best1O88870 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24,31■■□□□ 1,48
Best1O88870 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24,3■■□□□ 1,48
Best1O88870 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24,29■■□□□ 1,48
Best1O88870 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24,29■■□□□ 1,48
Best1O88870 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24,28■■□□□ 1,48
Best1O88870 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24,28■■□□□ 1,48
Best1O88870 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24,27■■□□□ 1,48
Best1O88870 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24,25■■□□□ 1,47
Best1O88870 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Best1O88870 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24,24■■□□□ 1,47
Best1O88870 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Best1O88870 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Best1O88870 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24,21■■□□□ 1,47
Best1O88870 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24,21■■□□□ 1,47
Best1O88870 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24,21■■□□□ 1,47
Best1O88870 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24,2■■□□□ 1,46
Best1O88870 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24,2■■□□□ 1,46
Best1O88870 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24,2■■□□□ 1,46
Best1O88870 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24,2■■□□□ 1,46
Best1O88870 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24,19■■□□□ 1,46
Best1O88870 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Best1O88870 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24,17■■□□□ 1,46
Best1O88870 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Best1O88870 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24,17■■□□□ 1,46
Best1O88870 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24,16■■□□□ 1,46
Best1O88870 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24,16■■□□□ 1,46
Best1O88870 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24,16■■□□□ 1,46
Best1O88870 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24,14■■□□□ 1,46
Best1O88870 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24,13■■□□□ 1,45
Best1O88870 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24,12■■□□□ 1,45
Best1O88870 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24,11■■□□□ 1,45
Best1O88870 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24,1■■□□□ 1,45
Best1O88870 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24,09■■□□□ 1,45
Best1O88870 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24,08■■□□□ 1,45
Best1O88870 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24,08■■□□□ 1,45
Best1O88870 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24,08■■□□□ 1,44
Best1O88870 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Best1O88870 Gm9939-201ENSMUST00000067161 1154 ntBASIC24,07■■□□□ 1,44
Best1O88870 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24,06■■□□□ 1,44
Best1O88870 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24,06■■□□□ 1,44
Best1O88870 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24,06■■□□□ 1,44
Best1O88870 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24,04■■□□□ 1,44
Best1O88870 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24,04■■□□□ 1,44
Best1O88870 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24,03■■□□□ 1,44
Best1O88870 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Best1O88870 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,01■■□□□ 1,43
Best1O88870 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24,01■■□□□ 1,43
Best1O88870 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24,01■■□□□ 1,43
Best1O88870 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24,01■■□□□ 1,43
Best1O88870 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1,43
Best1O88870 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1,43
Best1O88870 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Best1O88870 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Best1O88870 Gm8503-201ENSMUST00000118131 455 ntBASIC23,98■■□□□ 1,43
Best1O88870 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23,97■■□□□ 1,43
Best1O88870 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23,96■■□□□ 1,43
Best1O88870 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23,96■■□□□ 1,43
Best1O88870 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23,95■■□□□ 1,42
Best1O88870 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23,95■■□□□ 1,42
Best1O88870 Gm42809-201ENSMUST00000198429 1138 ntBASIC23,94■■□□□ 1,42
Best1O88870 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23,93■■□□□ 1,42
Best1O88870 Gm6821-201ENSMUST00000107540 542 ntBASIC23,93■■□□□ 1,42
Best1O88870 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23,93■■□□□ 1,42
Best1O88870 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23,93■■□□□ 1,42
Best1O88870 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23,92■■□□□ 1,42
Best1O88870 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23,92■■□□□ 1,42
Best1O88870 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23,91■■□□□ 1,42
Best1O88870 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23,9■■□□□ 1,42
Best1O88870 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23,9■■□□□ 1,42
Best1O88870 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23,89■■□□□ 1,42
Best1O88870 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,42
Best1O88870 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,41
Best1O88870 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23,89■■□□□ 1,41
Best1O88870 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23,89■■□□□ 1,41
Best1O88870 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,41
Best1O88870 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23,89■■□□□ 1,41
Best1O88870 Nkain2-201ENSMUST00000092602 558 ntBASIC23,89■■□□□ 1,41
Best1O88870 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,41
Best1O88870 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23,87■■□□□ 1,41
Best1O88870 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms