Protein–RNA interactions for Protein: O35437

Tcf21, Transcription factor 21, mousemouse

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf21O35437 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcf21O35437 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcf21O35437 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcf21O35437 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcf21O35437 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.28■□□□□ 0.68
Tcf21O35437 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf21O35437 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.27■□□□□ 0.68
Tcf21O35437 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf21O35437 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf21O35437 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf21O35437 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.26■□□□□ 0.67
Tcf21O35437 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf21O35437 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf21O35437 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf21O35437 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf21O35437 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.25■□□□□ 0.67
Tcf21O35437 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf21O35437 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf21O35437 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf21O35437 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf21O35437 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf21O35437 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tcf21O35437 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcf21O35437 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.22■□□□□ 0.67
Tcf21O35437 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tcf21O35437 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tcf21O35437 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcf21O35437 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tcf21O35437 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tcf21O35437 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcf21O35437 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.2■□□□□ 0.66
Tcf21O35437 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tcf21O35437 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcf21O35437 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tcf21O35437 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tcf21O35437 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.18■□□□□ 0.66
Tcf21O35437 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tcf21O35437 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.17■□□□□ 0.66
Tcf21O35437 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tcf21O35437 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcf21O35437 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tcf21O35437 Mipep-204ENSMUST00000225043 1548 ntBASIC19.16■□□□□ 0.66
Tcf21O35437 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tcf21O35437 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tcf21O35437 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcf21O35437 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcf21O35437 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.14■□□□□ 0.65
Tcf21O35437 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tcf21O35437 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tcf21O35437 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.14■□□□□ 0.65
Tcf21O35437 Gm45855-201ENSMUST00000212546 880 ntBASIC19.13■□□□□ 0.65
Tcf21O35437 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tcf21O35437 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tcf21O35437 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tcf21O35437 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tcf21O35437 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tcf21O35437 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tcf21O35437 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.11■□□□□ 0.65
Tcf21O35437 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tcf21O35437 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Tcf21O35437 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Tcf21O35437 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tcf21O35437 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tcf21O35437 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tcf21O35437 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tcf21O35437 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tcf21O35437 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tcf21O35437 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tcf21O35437 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tcf21O35437 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tcf21O35437 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tcf21O35437 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.06■□□□□ 0.64
Tcf21O35437 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tcf21O35437 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.05■□□□□ 0.64
Tcf21O35437 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tcf21O35437 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Tcf21O35437 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tcf21O35437 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tcf21O35437 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tcf21O35437 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tcf21O35437 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tcf21O35437 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tcf21O35437 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tcf21O35437 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tcf21O35437 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcf21O35437 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tcf21O35437 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tcf21O35437 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tcf21O35437 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tcf21O35437 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcf21O35437 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcf21O35437 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Tcf21O35437 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcf21O35437 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcf21O35437 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcf21O35437 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Tcf21O35437 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.97■□□□□ 0.63
Tcf21O35437 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tcf21O35437 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tcf21O35437 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms