Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Trim34bJ3QNR8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
Trim34bJ3QNR8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.97■■■□□ 2.55
Trim34bJ3QNR8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Trim34bJ3QNR8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Trim34bJ3QNR8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Trim34bJ3QNR8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Trim34bJ3QNR8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Trim34bJ3QNR8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Trim34bJ3QNR8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim34bJ3QNR8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
Trim34bJ3QNR8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim34bJ3QNR8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Trim34bJ3QNR8 Gm6821-201ENSMUST00000107540 542 ntBASIC30.89■■■□□ 2.54
Trim34bJ3QNR8 Gm8503-201ENSMUST00000118131 455 ntBASIC30.89■■■□□ 2.54
Trim34bJ3QNR8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Trim34bJ3QNR8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Trim34bJ3QNR8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.88■■■□□ 2.53
Trim34bJ3QNR8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.87■■■□□ 2.53
Trim34bJ3QNR8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Trim34bJ3QNR8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Trim34bJ3QNR8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trim34bJ3QNR8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trim34bJ3QNR8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trim34bJ3QNR8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Trim34bJ3QNR8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Trim34bJ3QNR8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.79■■■□□ 2.52
Trim34bJ3QNR8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Trim34bJ3QNR8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trim34bJ3QNR8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Trim34bJ3QNR8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Trim34bJ3QNR8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Trim34bJ3QNR8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Trim34bJ3QNR8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Trim34bJ3QNR8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim34bJ3QNR8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim34bJ3QNR8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim34bJ3QNR8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trim34bJ3QNR8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trim34bJ3QNR8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
Trim34bJ3QNR8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.72■■■□□ 2.51
Trim34bJ3QNR8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Trim34bJ3QNR8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Trim34bJ3QNR8 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.7■■■□□ 2.51
Trim34bJ3QNR8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Trim34bJ3QNR8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.69■■■□□ 2.5
Trim34bJ3QNR8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.66■■■□□ 2.5
Trim34bJ3QNR8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Trim34bJ3QNR8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Trim34bJ3QNR8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Trim34bJ3QNR8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Trim34bJ3QNR8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Trim34bJ3QNR8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Trim34bJ3QNR8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Trim34bJ3QNR8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Trim34bJ3QNR8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Trim34bJ3QNR8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Trim34bJ3QNR8 Nkain2-201ENSMUST00000092602 558 ntBASIC30.61■■■□□ 2.49
Trim34bJ3QNR8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.6■■■□□ 2.49
Trim34bJ3QNR8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Trim34bJ3QNR8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Trim34bJ3QNR8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.58■■■□□ 2.49
Trim34bJ3QNR8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
Trim34bJ3QNR8 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.57■■■□□ 2.48
Trim34bJ3QNR8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Trim34bJ3QNR8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.57■■■□□ 2.48
Trim34bJ3QNR8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Trim34bJ3QNR8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Trim34bJ3QNR8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Trim34bJ3QNR8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Trim34bJ3QNR8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.54■■■□□ 2.48
Trim34bJ3QNR8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
Trim34bJ3QNR8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.53■■■□□ 2.48
Trim34bJ3QNR8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.52■■■□□ 2.48
Trim34bJ3QNR8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Trim34bJ3QNR8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Trim34bJ3QNR8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Trim34bJ3QNR8 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.5■■■□□ 2.47
Trim34bJ3QNR8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.5■■■□□ 2.47
Trim34bJ3QNR8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Trim34bJ3QNR8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
Trim34bJ3QNR8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Trim34bJ3QNR8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.47■■■□□ 2.47
Trim34bJ3QNR8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.46■■■□□ 2.47
Trim34bJ3QNR8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Trim34bJ3QNR8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Trim34bJ3QNR8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Trim34bJ3QNR8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Trim34bJ3QNR8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Trim34bJ3QNR8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
Trim34bJ3QNR8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.39■■■□□ 2.46
Trim34bJ3QNR8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Trim34bJ3QNR8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Trim34bJ3QNR8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Trim34bJ3QNR8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Trim34bJ3QNR8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Trim34bJ3QNR8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Trim34bJ3QNR8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Trim34bJ3QNR8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Trim34bJ3QNR8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms