Protein–RNA interactions for Protein: E9PUZ9

Pdzrn4, PDZ domain-containing RING finger 4, mousemouse

Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn4E9PUZ9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pdzrn4E9PUZ9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Pdzrn4E9PUZ9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Pdzrn4E9PUZ9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pdzrn4E9PUZ9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.28■■■□□ 2.12
Pdzrn4E9PUZ9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Pdzrn4E9PUZ9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.26■■■□□ 2.11
Pdzrn4E9PUZ9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pdzrn4E9PUZ9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pdzrn4E9PUZ9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pdzrn4E9PUZ9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
Pdzrn4E9PUZ9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pdzrn4E9PUZ9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.24■■■□□ 2.11
Pdzrn4E9PUZ9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Pdzrn4E9PUZ9 Mir6538-201ENSMUST00000183713 110 ntBASIC28.23■■■□□ 2.11
Pdzrn4E9PUZ9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pdzrn4E9PUZ9 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.22■■■□□ 2.11
Pdzrn4E9PUZ9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pdzrn4E9PUZ9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.21■■■□□ 2.11
Pdzrn4E9PUZ9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Pdzrn4E9PUZ9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Pdzrn4E9PUZ9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Pdzrn4E9PUZ9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pdzrn4E9PUZ9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Pdzrn4E9PUZ9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.18■■■□□ 2.1
Pdzrn4E9PUZ9 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.18■■■□□ 2.1
Pdzrn4E9PUZ9 Cap2-205ENSMUST00000225824 1634 ntBASIC28.18■■■□□ 2.1
Pdzrn4E9PUZ9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Pdzrn4E9PUZ9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Pdzrn4E9PUZ9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pdzrn4E9PUZ9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pdzrn4E9PUZ9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Pdzrn4E9PUZ9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pdzrn4E9PUZ9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pdzrn4E9PUZ9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.12■■■□□ 2.09
Pdzrn4E9PUZ9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Pdzrn4E9PUZ9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pdzrn4E9PUZ9 Gm7432-201ENSMUST00000210343 879 ntBASIC28.11■■■□□ 2.09
Pdzrn4E9PUZ9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pdzrn4E9PUZ9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.1■■■□□ 2.09
Pdzrn4E9PUZ9 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.1■■■□□ 2.09
Pdzrn4E9PUZ9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pdzrn4E9PUZ9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Pdzrn4E9PUZ9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pdzrn4E9PUZ9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.08■■■□□ 2.09
Pdzrn4E9PUZ9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Pdzrn4E9PUZ9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Pdzrn4E9PUZ9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Pdzrn4E9PUZ9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pdzrn4E9PUZ9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Pdzrn4E9PUZ9 Gm11175-201ENSMUST00000116172 543 ntBASIC28.06■■■□□ 2.08
Pdzrn4E9PUZ9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Pdzrn4E9PUZ9 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.04■■■□□ 2.08
Pdzrn4E9PUZ9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Pdzrn4E9PUZ9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pdzrn4E9PUZ9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pdzrn4E9PUZ9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pdzrn4E9PUZ9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pdzrn4E9PUZ9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
Pdzrn4E9PUZ9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Pdzrn4E9PUZ9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Pdzrn4E9PUZ9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Pdzrn4E9PUZ9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pdzrn4E9PUZ9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
Pdzrn4E9PUZ9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.94■■■□□ 2.06
Pdzrn4E9PUZ9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pdzrn4E9PUZ9 Nkain2-201ENSMUST00000092602 558 ntBASIC27.93■■■□□ 2.06
Pdzrn4E9PUZ9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Pdzrn4E9PUZ9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Pdzrn4E9PUZ9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pdzrn4E9PUZ9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pdzrn4E9PUZ9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Pdzrn4E9PUZ9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.89■■■□□ 2.06
Pdzrn4E9PUZ9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Pdzrn4E9PUZ9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Pdzrn4E9PUZ9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Pdzrn4E9PUZ9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.88■■■□□ 2.05
Pdzrn4E9PUZ9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.88■■■□□ 2.05
Pdzrn4E9PUZ9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Pdzrn4E9PUZ9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Pdzrn4E9PUZ9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pdzrn4E9PUZ9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pdzrn4E9PUZ9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pdzrn4E9PUZ9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Pdzrn4E9PUZ9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Pdzrn4E9PUZ9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pdzrn4E9PUZ9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Pdzrn4E9PUZ9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
Pdzrn4E9PUZ9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Pdzrn4E9PUZ9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Pdzrn4E9PUZ9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Pdzrn4E9PUZ9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Pdzrn4E9PUZ9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Pdzrn4E9PUZ9 Gm11599-201ENSMUST00000118720 878 ntBASIC27.8■■■□□ 2.04
Pdzrn4E9PUZ9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Pdzrn4E9PUZ9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.79■■■□□ 2.04
Pdzrn4E9PUZ9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Pdzrn4E9PUZ9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pdzrn4E9PUZ9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.76■■■□□ 2.03
Pdzrn4E9PUZ9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms