Protein–RNA interactions for Protein: A0A140T8N5

Igkv6-23, Immunoglobulin kappa variable 6-23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-23A0A140T8N5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv6-23A0A140T8N5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv6-23A0A140T8N5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv6-23A0A140T8N5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv6-23A0A140T8N5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Igkv6-23A0A140T8N5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Igkv6-23A0A140T8N5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Igkv6-23A0A140T8N5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Igkv6-23A0A140T8N5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Igkv6-23A0A140T8N5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Igkv6-23A0A140T8N5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Igkv6-23A0A140T8N5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Igkv6-23A0A140T8N5 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.33■■□□□ 1.17
Igkv6-23A0A140T8N5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Igkv6-23A0A140T8N5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Igkv6-23A0A140T8N5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Igkv6-23A0A140T8N5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Igkv6-23A0A140T8N5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Igkv6-23A0A140T8N5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.31■■□□□ 1.16
Igkv6-23A0A140T8N5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Igkv6-23A0A140T8N5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Igkv6-23A0A140T8N5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.3■■□□□ 1.16
Igkv6-23A0A140T8N5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Igkv6-23A0A140T8N5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv6-23A0A140T8N5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Igkv6-23A0A140T8N5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv6-23A0A140T8N5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv6-23A0A140T8N5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Igkv6-23A0A140T8N5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
Igkv6-23A0A140T8N5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Igkv6-23A0A140T8N5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Igkv6-23A0A140T8N5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Igkv6-23A0A140T8N5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.26■■□□□ 1.15
Igkv6-23A0A140T8N5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Igkv6-23A0A140T8N5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Igkv6-23A0A140T8N5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Igkv6-23A0A140T8N5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Igkv6-23A0A140T8N5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv6-23A0A140T8N5 Gm8503-201ENSMUST00000118131 455 ntBASIC22.24■■□□□ 1.15
Igkv6-23A0A140T8N5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv6-23A0A140T8N5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Igkv6-23A0A140T8N5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv6-23A0A140T8N5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv6-23A0A140T8N5 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.21■■□□□ 1.15
Igkv6-23A0A140T8N5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv6-23A0A140T8N5 Gm6821-201ENSMUST00000107540 542 ntBASIC22.2■■□□□ 1.14
Igkv6-23A0A140T8N5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv6-23A0A140T8N5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv6-23A0A140T8N5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Igkv6-23A0A140T8N5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Igkv6-23A0A140T8N5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Igkv6-23A0A140T8N5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Igkv6-23A0A140T8N5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.16■■□□□ 1.14
Igkv6-23A0A140T8N5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Igkv6-23A0A140T8N5 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.14■■□□□ 1.13
Igkv6-23A0A140T8N5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Igkv6-23A0A140T8N5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Igkv6-23A0A140T8N5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.12■■□□□ 1.13
Igkv6-23A0A140T8N5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.12■■□□□ 1.13
Igkv6-23A0A140T8N5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv6-23A0A140T8N5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv6-23A0A140T8N5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.11■■□□□ 1.13
Igkv6-23A0A140T8N5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv6-23A0A140T8N5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Igkv6-23A0A140T8N5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv6-23A0A140T8N5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.1■■□□□ 1.13
Igkv6-23A0A140T8N5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv6-23A0A140T8N5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Igkv6-23A0A140T8N5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Igkv6-23A0A140T8N5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv6-23A0A140T8N5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Igkv6-23A0A140T8N5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.06■■□□□ 1.12
Igkv6-23A0A140T8N5 Nkain2-201ENSMUST00000092602 558 ntBASIC22.06■■□□□ 1.12
Igkv6-23A0A140T8N5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv6-23A0A140T8N5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv6-23A0A140T8N5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Igkv6-23A0A140T8N5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv6-23A0A140T8N5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Igkv6-23A0A140T8N5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.03■■□□□ 1.12
Igkv6-23A0A140T8N5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Igkv6-23A0A140T8N5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Igkv6-23A0A140T8N5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Igkv6-23A0A140T8N5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Igkv6-23A0A140T8N5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Igkv6-23A0A140T8N5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Igkv6-23A0A140T8N5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Igkv6-23A0A140T8N5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Igkv6-23A0A140T8N5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Igkv6-23A0A140T8N5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.98■■□□□ 1.11
Igkv6-23A0A140T8N5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.98■■□□□ 1.11
Igkv6-23A0A140T8N5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Igkv6-23A0A140T8N5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Igkv6-23A0A140T8N5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Igkv6-23A0A140T8N5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Igkv6-23A0A140T8N5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.96■■□□□ 1.11
Igkv6-23A0A140T8N5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Igkv6-23A0A140T8N5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Igkv6-23A0A140T8N5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Igkv6-23A0A140T8N5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Igkv6-23A0A140T8N5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms