Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC55.08■■■■■ 6.41
Gm35339A0A140LHH9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC55.06■■■■■ 6.4
Gm35339A0A140LHH9 Gm7432-201ENSMUST00000210343 879 ntBASIC55.04■■■■■ 6.4
Gm35339A0A140LHH9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC55.04■■■■■ 6.4
Gm35339A0A140LHH9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC55.03■■■■■ 6.4
Gm35339A0A140LHH9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC55.02■■■■■ 6.4
Gm35339A0A140LHH9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC55.01■■■■■ 6.4
Gm35339A0A140LHH9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC55■■■■■ 6.4
Gm35339A0A140LHH9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC55■■■■■ 6.39
Gm35339A0A140LHH9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC54.99■■■■■ 6.39
Gm35339A0A140LHH9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC54.98■■■■■ 6.39
Gm35339A0A140LHH9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC54.95■■■■■ 6.39
Gm35339A0A140LHH9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC54.89■■■■■ 6.38
Gm35339A0A140LHH9 Mir6538-201ENSMUST00000183713 110 ntBASIC54.89■■■■■ 6.38
Gm35339A0A140LHH9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC54.87■■■■■ 6.37
Gm35339A0A140LHH9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC54.87■■■■■ 6.37
Gm35339A0A140LHH9 Gm11175-201ENSMUST00000116172 543 ntBASIC54.86■■■■■ 6.37
Gm35339A0A140LHH9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC54.85■■■■■ 6.37
Gm35339A0A140LHH9 Gm11599-201ENSMUST00000118720 878 ntBASIC54.85■■■■■ 6.37
Gm35339A0A140LHH9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC54.84■■■■■ 6.37
Gm35339A0A140LHH9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC54.84■■■■■ 6.37
Gm35339A0A140LHH9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC54.84■■■■■ 6.37
Gm35339A0A140LHH9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC54.84■■■■■ 6.37
Gm35339A0A140LHH9 Gm30346-201ENSMUST00000218641 1699 ntBASIC54.83■■■■■ 6.37
Gm35339A0A140LHH9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC54.82■■■■■ 6.37
Gm35339A0A140LHH9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC54.81■■■■■ 6.36
Gm35339A0A140LHH9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC54.79■■■■■ 6.36
Gm35339A0A140LHH9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC54.79■■■■■ 6.36
Gm35339A0A140LHH9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC54.77■■■■■ 6.36
Gm35339A0A140LHH9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC54.76■■■■■ 6.36
Gm35339A0A140LHH9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC54.75■■■■■ 6.35
Gm35339A0A140LHH9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC54.74■■■■■ 6.35
Gm35339A0A140LHH9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC54.73■■■■■ 6.35
Gm35339A0A140LHH9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC54.73■■■■■ 6.35
Gm35339A0A140LHH9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC54.72■■■■■ 6.35
Gm35339A0A140LHH9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC54.7■■■■■ 6.35
Gm35339A0A140LHH9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC54.7■■■■■ 6.35
Gm35339A0A140LHH9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC54.68■■■■■ 6.34
Gm35339A0A140LHH9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC54.66■■■■■ 6.34
Gm35339A0A140LHH9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC54.64■■■■■ 6.34
Gm35339A0A140LHH9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC54.62■■■■■ 6.34
Gm35339A0A140LHH9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC54.6■■■■■ 6.33
Gm35339A0A140LHH9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC54.6■■■■■ 6.33
Gm35339A0A140LHH9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC54.6■■■■■ 6.33
Gm35339A0A140LHH9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC54.58■■■■■ 6.33
Gm35339A0A140LHH9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC54.58■■■■■ 6.33
Gm35339A0A140LHH9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC54.56■■■■■ 6.32
Gm35339A0A140LHH9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC54.56■■■■■ 6.32
Gm35339A0A140LHH9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC54.56■■■■■ 6.32
Gm35339A0A140LHH9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC54.55■■■■■ 6.32
Gm35339A0A140LHH9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC54.55■■■■■ 6.32
Gm35339A0A140LHH9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC54.51■■■■■ 6.32
Gm35339A0A140LHH9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC54.5■■■■■ 6.31
Gm35339A0A140LHH9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC54.49■■■■■ 6.31
Gm35339A0A140LHH9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC54.49■■■■■ 6.31
Gm35339A0A140LHH9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC54.48■■■■■ 6.31
Gm35339A0A140LHH9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC54.45■■■■■ 6.31
Gm35339A0A140LHH9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC54.44■■■■■ 6.31
Gm35339A0A140LHH9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC54.44■■■■■ 6.3
Gm35339A0A140LHH9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC54.42■■■■■ 6.3
Gm35339A0A140LHH9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC54.4■■■■■ 6.3
Gm35339A0A140LHH9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC54.39■■■■■ 6.3
Gm35339A0A140LHH9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC54.38■■■■■ 6.3
Gm35339A0A140LHH9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC54.38■■■■■ 6.3
Gm35339A0A140LHH9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC54.36■■■■■ 6.29
Gm35339A0A140LHH9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC54.35■■■■■ 6.29
Gm35339A0A140LHH9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC54.34■■■■■ 6.29
Gm35339A0A140LHH9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC54.32■■■■■ 6.29
Gm35339A0A140LHH9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC54.31■■■■■ 6.29
Gm35339A0A140LHH9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC54.31■■■■■ 6.28
Gm35339A0A140LHH9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC54.31■■■■■ 6.28
Gm35339A0A140LHH9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC54.28■■■■■ 6.28
Gm35339A0A140LHH9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC54.26■■■■■ 6.28
Gm35339A0A140LHH9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC54.25■■■■■ 6.27
Gm35339A0A140LHH9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC54.24■■■■■ 6.27
Gm35339A0A140LHH9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC54.24■■■■■ 6.27
Gm35339A0A140LHH9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC54.23■■■■■ 6.27
Gm35339A0A140LHH9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC54.2■■■■■ 6.27
Gm35339A0A140LHH9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC54.19■■■■■ 6.27
Gm35339A0A140LHH9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC54.18■■■■■ 6.26
Gm35339A0A140LHH9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC54.17■■■■■ 6.26
Gm35339A0A140LHH9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC54.17■■■■■ 6.26
Gm35339A0A140LHH9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC54.15■■■■■ 6.26
Gm35339A0A140LHH9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC54.15■■■■■ 6.26
Gm35339A0A140LHH9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC54.14■■■■■ 6.26
Gm35339A0A140LHH9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC54.14■■■■■ 6.26
Gm35339A0A140LHH9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC54.11■■■■■ 6.25
Gm35339A0A140LHH9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC54.1■■■■■ 6.25
Gm35339A0A140LHH9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC54.1■■■■■ 6.25
Gm35339A0A140LHH9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC54.09■■■■■ 6.25
Gm35339A0A140LHH9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC54.09■■■■■ 6.25
Gm35339A0A140LHH9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC54.08■■■■■ 6.25
Gm35339A0A140LHH9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC54.06■■■■■ 6.24
Gm35339A0A140LHH9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC54.05■■■■■ 6.24
Gm35339A0A140LHH9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC54.05■■■■■ 6.24
Gm35339A0A140LHH9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC54.04■■■■■ 6.24
Gm35339A0A140LHH9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC54.04■■■■■ 6.24
Gm35339A0A140LHH9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC54.01■■■■■ 6.24
Gm35339A0A140LHH9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC53.99■■■■■ 6.23
Gm35339A0A140LHH9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC53.99■■■■■ 6.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms