Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Rab21-202ENSMUST00000218831 843 ntBASIC19.31■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trbv13-3A0A0B4J1H2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trbv13-3A0A0B4J1H2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv13-3A0A0B4J1H2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.27■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv13-3A0A0B4J1H2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.26■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.24■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.21■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv13-3A0A0B4J1H2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Trbv13-3A0A0B4J1H2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.18■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv13-3A0A0B4J1H2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.16■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.16■□□□□ 0.66
Trbv13-3A0A0B4J1H2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv13-3A0A0B4J1H2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.09■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv13-3A0A0B4J1H2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.08■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.03■□□□□ 0.64
Trbv13-3A0A0B4J1H2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trbv13-3A0A0B4J1H2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv13-3A0A0B4J1H2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv13-3A0A0B4J1H2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv13-3A0A0B4J1H2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms