Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 KRT87P-202ENST00000534226 1464 ntBASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB11Q9Y5F2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 MIR663A-201ENST00000385250 93 ntBASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB11Q9Y5F2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDHB11Q9Y5F2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHB11Q9Y5F2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PCDHB11Q9Y5F2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 AC010542.4-201ENST00000563151 1910 ntBASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB11Q9Y5F2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 AC026471.6-201ENST00000622954 1905 ntBASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB11Q9Y5F2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 AC003102.1-202ENST00000563394 1796 ntBASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 ABHD17AP1-201ENST00000358206 933 ntBASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 TMEM191A-211ENST00000637163 1067 ntBASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB11Q9Y5F2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms