Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB2Q9Y5E7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB2Q9Y5E7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 TERF1P5-201ENST00000477545 1207 ntBASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
PCDHB2Q9Y5E7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 AC008175.2-201ENST00000612840 297 ntBASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB2Q9Y5E7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 TSPY6P-201ENST00000448518 926 ntBASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 AC013268.1-206ENST00000638368 961 ntBASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 AC112229.1-201ENST00000639295 961 ntBASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 AC003102.1-202ENST00000563394 1796 ntBASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PCDHB2Q9Y5E7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 FAM99A-202ENST00000538190 1989 ntBASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 AC120498.10-201ENST00000621827 505 ntBASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB2Q9Y5E7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 POU5F1P4-201ENST00000413175 1085 ntBASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 GUSBP6-202ENST00000438529 1198 ntBASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB2Q9Y5E7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23■■□□□ 1.27
PCDHB2Q9Y5E7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHB2Q9Y5E7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHB2Q9Y5E7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
PCDHB2Q9Y5E7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23■■□□□ 1.27
PCDHB2Q9Y5E7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23■■□□□ 1.27
PCDHB2Q9Y5E7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHB2Q9Y5E7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23■■□□□ 1.27
PCDHB2Q9Y5E7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PCDHB2Q9Y5E7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms