Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC42Q9Y546 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LRRC42Q9Y546 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC42Q9Y546 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC42Q9Y546 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
LRRC42Q9Y546 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC42Q9Y546 FP325331.1-202ENST00000623531 1380 ntBASIC19.83■□□□□ 0.76
LRRC42Q9Y546 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRRC42Q9Y546 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC42Q9Y546 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 AC009086.3-201ENST00000623486 1008 ntBASIC19.8■□□□□ 0.76
LRRC42Q9Y546 AC022413.1-201ENST00000624602 984 ntBASIC19.8■□□□□ 0.76
LRRC42Q9Y546 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC42Q9Y546 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LRRC42Q9Y546 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC42Q9Y546 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms