Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM2Q9Y333 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LSM2Q9Y333 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM2Q9Y333 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM2Q9Y333 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM2Q9Y333 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM2Q9Y333 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM2Q9Y333 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM2Q9Y333 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.69■□□□□ 0.58
LSM2Q9Y333 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM2Q9Y333 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM2Q9Y333 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.69■□□□□ 0.58
LSM2Q9Y333 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 AC241377.3-202ENST00000626088 1088 ntBASIC18.69■□□□□ 0.58
LSM2Q9Y333 AC241585.3-202ENST00000628937 1088 ntBASIC18.69■□□□□ 0.58
LSM2Q9Y333 AC245100.8-202ENST00000629247 1058 ntBASIC18.69■□□□□ 0.58
LSM2Q9Y333 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 AC007225.1-201ENST00000566331 1836 ntBASIC18.69■□□□□ 0.58
LSM2Q9Y333 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.69■□□□□ 0.58
LSM2Q9Y333 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM2Q9Y333 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM2Q9Y333 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM2Q9Y333 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM2Q9Y333 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM2Q9Y333 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 AC006455.2-201ENST00000429931 906 ntBASIC18.68■□□□□ 0.58
LSM2Q9Y333 AC010141.3-201ENST00000456659 717 ntBASIC18.68■□□□□ 0.58
LSM2Q9Y333 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM2Q9Y333 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LSM2Q9Y333 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM2Q9Y333 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM2Q9Y333 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM2Q9Y333 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM2Q9Y333 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM2Q9Y333 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LSM2Q9Y333 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSM2Q9Y333 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM2Q9Y333 AC112907.3-201ENST00000577781 2400 ntBASIC18.67■□□□□ 0.58
LSM2Q9Y333 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM2Q9Y333 MTDHP2-201ENST00000601468 714 ntBASIC18.67■□□□□ 0.58
LSM2Q9Y333 pRNA.6-201ENST00000610482 90 ntBASIC18.67■□□□□ 0.58
LSM2Q9Y333 pRNA.5-201ENST00000612139 90 ntBASIC18.67■□□□□ 0.58
LSM2Q9Y333 pRNA.11-201ENST00000618423 90 ntBASIC18.67■□□□□ 0.58
LSM2Q9Y333 pRNA.13-201ENST00000619112 90 ntBASIC18.67■□□□□ 0.58
LSM2Q9Y333 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM2Q9Y333 AL512408.1-201ENST00000569378 2000 ntBASIC18.67■□□□□ 0.58
LSM2Q9Y333 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM2Q9Y333 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LSM2Q9Y333 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM2Q9Y333 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM2Q9Y333 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 AC121338.2-201ENST00000622535 1744 ntBASIC18.66■□□□□ 0.58
LSM2Q9Y333 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 AC087239.1-201ENST00000622671 572 ntBASIC18.66■□□□□ 0.58
LSM2Q9Y333 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 AP004607.7-201ENST00000527152 1677 ntBASIC18.66■□□□□ 0.58
LSM2Q9Y333 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM2Q9Y333 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM2Q9Y333 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM2Q9Y333 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM2Q9Y333 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LSM2Q9Y333 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM2Q9Y333 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LSM2Q9Y333 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM2Q9Y333 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM2Q9Y333 OR2I1P-207ENST00000453522 948 ntBASIC18.65■□□□□ 0.58
LSM2Q9Y333 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM2Q9Y333 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM2Q9Y333 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms