Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CDK11AQ9UQ88 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC32.7■■■□□ 2.82
CDK11AQ9UQ88 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CDK11AQ9UQ88 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 AC093323.1-202ENST00000635031 2045 ntBASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 AL158047.1-201ENST00000445918 881 ntBASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CDK11AQ9UQ88 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CDK11AQ9UQ88 KRT17P1-201ENST00000399211 1546 ntBASIC32.67■■■□□ 2.82
CDK11AQ9UQ88 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC32.67■■■□□ 2.82
CDK11AQ9UQ88 AC245052.3-201ENST00000450182 901 ntBASIC32.67■■■□□ 2.82
CDK11AQ9UQ88 CDV3P1-201ENST00000471403 739 ntBASIC32.67■■■□□ 2.82
CDK11AQ9UQ88 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
CDK11AQ9UQ88 AC092053.2-201ENST00000640557 1818 ntBASIC32.67■■■□□ 2.82
CDK11AQ9UQ88 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC32.67■■■□□ 2.82
CDK11AQ9UQ88 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 CYP2T3P-201ENST00000601990 817 ntBASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC32.66■■■□□ 2.82
CDK11AQ9UQ88 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 AC073648.6-201ENST00000641589 218 ntBASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
CDK11AQ9UQ88 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 COMT-203ENST00000403184 2217 ntTSL 2 BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 AL355472.2-201ENST00000422958 438 ntBASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 NME6-213ENST00000451657 871 ntTSL 2 BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 LTK-203ENST00000453182 2412 ntTSL 2 BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 NFE2L3P1-201ENST00000588207 1959 ntBASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
CDK11AQ9UQ88 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CDK11AQ9UQ88 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 ARL16-209ENST00000573715 763 ntTSL 3 BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 ARL16-211ENST00000576135 694 ntTSL 3 BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 HLA-B-256ENST00000639848 1089 ntBASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CDK11AQ9UQ88 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDK11AQ9UQ88 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CDK11AQ9UQ88 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDK11AQ9UQ88 AC060766.5-201ENST00000590539 871 ntBASIC32.61■■■□□ 2.81
CDK11AQ9UQ88 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC32.61■■■□□ 2.81
CDK11AQ9UQ88 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC32.6■■■□□ 2.81
CDK11AQ9UQ88 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
CDK11AQ9UQ88 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDK11AQ9UQ88 RPS2P4-201ENST00000476944 856 ntBASIC32.6■■■□□ 2.81
CDK11AQ9UQ88 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC32.6■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms