Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NOTCH3Q9UM47 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.15■□□□□ 0.18
NOTCH3Q9UM47 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.15■□□□□ 0.18
NOTCH3Q9UM47 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NOTCH3Q9UM47 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.15■□□□□ 0.18
NOTCH3Q9UM47 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NOTCH3Q9UM47 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NOTCH3Q9UM47 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NOTCH3Q9UM47 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 KRT18P29-201ENST00000397031 1267 ntBASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
NOTCH3Q9UM47 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 UNC93B5-201ENST00000530315 699 ntBASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.14■□□□□ 0.17
NOTCH3Q9UM47 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 AC098590.1-201ENST00000468126 897 ntBASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 AL512625.2-201ENST00000417533 625 ntBASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 TERF1P5-201ENST00000477545 1207 ntBASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 AC020763.4-201ENST00000623414 4170 ntBASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOTCH3Q9UM47 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 CYP2T1P-201ENST00000432607 1285 ntBASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 RPS2P52-201ENST00000469610 820 ntBASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 AL162412.1-201ENST00000567129 965 ntBASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 AC142381.4-202ENST00000563973 229 ntBASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NOTCH3Q9UM47 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 AC008550.1-201ENST00000511500 884 ntBASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms