Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 LINC01521-201ENST00000504184 1943 ntBASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LIN7CQ9NUP9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.4■□□□□ 0.38
LIN7CQ9NUP9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LIN7CQ9NUP9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
LIN7CQ9NUP9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LIN7CQ9NUP9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.39■□□□□ 0.38
LIN7CQ9NUP9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LIN7CQ9NUP9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LIN7CQ9NUP9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 IGHV3-19-201ENST00000521488 291 ntBASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LIN7CQ9NUP9 AC073130.3-201ENST00000624389 2278 ntBASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIN7CQ9NUP9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LIN7CQ9NUP9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms