Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 BX276092.2-201ENST00000417668 665 ntBASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 AC006058.3-201ENST00000606217 1069 ntBASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDLIM7Q9NR12 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 AC008694.1-202ENST00000636953 945 ntBASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 AC012676.1-201ENST00000574705 1949 ntBASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDLIM7Q9NR12 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 AC128676.1-201ENST00000454392 318 ntBASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 AC069236.1-201ENST00000604339 616 ntBASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 AC133561.1-201ENST00000568600 2415 ntBASIC23.67■■□□□ 1.38
PDLIM7Q9NR12 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 AC097658.1-201ENST00000475555 843 ntBASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PDLIM7Q9NR12 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 AC026471.6-201ENST00000622954 1905 ntBASIC23.65■■□□□ 1.38
PDLIM7Q9NR12 ECEL1P1-201ENST00000373592 1742 ntBASIC23.64■■□□□ 1.38
PDLIM7Q9NR12 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PDLIM7Q9NR12 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PDLIM7Q9NR12 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.64■■□□□ 1.38
PDLIM7Q9NR12 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDLIM7Q9NR12 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.64■■□□□ 1.37
PDLIM7Q9NR12 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.64■■□□□ 1.37
PDLIM7Q9NR12 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.64■■□□□ 1.37
PDLIM7Q9NR12 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.64■■□□□ 1.37
PDLIM7Q9NR12 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDLIM7Q9NR12 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 EEF1DP3-203ENST00000566025 782 ntBASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.63■■□□□ 1.37
PDLIM7Q9NR12 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms