Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 AC010141.2-201ENST00000452426 721 ntBASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM9Q9NQV7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 AC016769.1-201ENST00000409132 1010 ntBASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM9Q9NQV7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 IKBKGP1-201ENST00000612193 1073 ntBASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM9Q9NQV7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 POU5F1P4-201ENST00000413175 1085 ntBASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 AL137784.2-201ENST00000607332 1000 ntBASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM9Q9NQV7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 AC006015.1-201ENST00000429970 570 ntBASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 KRT18P11-201ENST00000435214 1283 ntBASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 KRT18P20-201ENST00000548986 1279 ntBASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 AC008175.2-201ENST00000612840 297 ntBASIC19.83■□□□□ 0.77
PRDM9Q9NQV7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRDM9Q9NQV7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PRDM9Q9NQV7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.83■□□□□ 0.76
PRDM9Q9NQV7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRDM9Q9NQV7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRDM9Q9NQV7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRDM9Q9NQV7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRDM9Q9NQV7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms