Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C12orf4Q9NQ89 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
C12orf4Q9NQ89 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
C12orf4Q9NQ89 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
C12orf4Q9NQ89 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
C12orf4Q9NQ89 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 RARRES2P1-201ENST00000474487 481 ntBASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 AL031602.1-201ENST00000633169 911 ntBASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C12orf4Q9NQ89 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
C12orf4Q9NQ89 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 AC087289.5-201ENST00000586076 3175 ntBASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 AC133637.1-201ENST00000624115 1537 ntBASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C12orf4Q9NQ89 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 Z98882.1-201ENST00000622160 2253 ntBASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C12orf4Q9NQ89 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 AC079089.2-201ENST00000531211 1277 ntBASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 AL451085.2-201ENST00000605085 799 ntBASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 AC005229.4-201ENST00000610085 2198 ntBASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
C12orf4Q9NQ89 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
C12orf4Q9NQ89 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms