Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MKKSQ9NPJ1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MKKSQ9NPJ1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MKKSQ9NPJ1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MKKSQ9NPJ1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MKKSQ9NPJ1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.91■□□□□ 0.78
MKKSQ9NPJ1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MKKSQ9NPJ1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MKKSQ9NPJ1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 CDCA4P2-201ENST00000441182 718 ntBASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MKKSQ9NPJ1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
MKKSQ9NPJ1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 AC026471.6-201ENST00000622954 1905 ntBASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MKKSQ9NPJ1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 C11orf96-202ENST00000528572 1834 ntBASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 AC026185.1-201ENST00000445748 174 ntBASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 RAP2CP1-201ENST00000605103 478 ntBASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MKKSQ9NPJ1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 AC010542.4-201ENST00000563151 1910 ntBASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
MKKSQ9NPJ1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MKKSQ9NPJ1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
MKKSQ9NPJ1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.86■□□□□ 0.77
MKKSQ9NPJ1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
MKKSQ9NPJ1 SLC7A5P2-201ENST00000553010 536 ntBASIC19.86■□□□□ 0.77
MKKSQ9NPJ1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.86■□□□□ 0.77
MKKSQ9NPJ1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
MKKSQ9NPJ1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.86■□□□□ 0.77
MKKSQ9NPJ1 AC231657.2-201ENST00000624556 255 ntBASIC19.86■□□□□ 0.77
MKKSQ9NPJ1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms