Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 BID-214ENST00000617586 542 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 MYCNOS-205ENST00000641950 531 ntBASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 AL024507.2-201ENST00000606070 2574 ntBASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP13A3Q9H7F0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 SLC7A5P2-201ENST00000553010 536 ntBASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 FBXW4P1-201ENST00000426721 2239 ntBASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A3Q9H7F0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 AC061975.6-201ENST00000579045 1553 ntBASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 KRT16P2-201ENST00000414673 1423 ntBASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 SLC7A5P1-201ENST00000568957 537 ntBASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP13A3Q9H7F0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A3Q9H7F0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A3Q9H7F0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms