Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.52■■■□□ 2
PCDH11XQ9BZA7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.52■■■□□ 2
PCDH11XQ9BZA7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.52■■■□□ 2
PCDH11XQ9BZA7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
PCDH11XQ9BZA7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.52■■■□□ 2
PCDH11XQ9BZA7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
PCDH11XQ9BZA7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
PCDH11XQ9BZA7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCDH11XQ9BZA7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.52■■■□□ 2
PCDH11XQ9BZA7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.51■■■□□ 2
PCDH11XQ9BZA7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.51■■■□□ 2
PCDH11XQ9BZA7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 CYP2T3P-201ENST00000601990 817 ntBASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC27.51■■□□□ 1.99
PCDH11XQ9BZA7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 AC245052.3-201ENST00000450182 901 ntBASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
PCDH11XQ9BZA7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 NME6-213ENST00000451657 871 ntTSL 2 BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 UNC93B4-201ENST00000505679 747 ntBASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDH11XQ9BZA7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 AL596275.1-201ENST00000423464 877 ntBASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 CDV3P1-201ENST00000471403 739 ntBASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 RPS2P4-201ENST00000476944 856 ntBASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 AC060766.5-201ENST00000590539 871 ntBASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDH11XQ9BZA7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 AC092053.2-201ENST00000640557 1818 ntBASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDH11XQ9BZA7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 AC008403.3-201ENST00000598924 454 ntBASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 HLA-B-256ENST00000639848 1089 ntBASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDH11XQ9BZA7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC27.45■■□□□ 1.99
PCDH11XQ9BZA7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PCDH11XQ9BZA7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
PCDH11XQ9BZA7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PCDH11XQ9BZA7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
PCDH11XQ9BZA7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDH11XQ9BZA7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDH11XQ9BZA7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDH11XQ9BZA7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC27.44■■□□□ 1.98
PCDH11XQ9BZA7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDH11XQ9BZA7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC27.44■■□□□ 1.98
PCDH11XQ9BZA7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
PCDH11XQ9BZA7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.44■■□□□ 1.98
PCDH11XQ9BZA7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDH11XQ9BZA7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms