Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 LSM12P1-201ENST00000411836 588 ntBASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 SERPINH1P1-201ENST00000419794 1249 ntBASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 NME6-213ENST00000451657 871 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 NFE2L3P1-201ENST00000588207 1959 ntBASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 CYP2T3P-201ENST00000601990 817 ntBASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11□□□□□ -0.65
KRTAP4-1Q9BYQ7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 Z99916.2-201ENST00000604037 246 ntBASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
KRTAP4-1Q9BYQ7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 RPPH1-201ENST00000516869 333 ntBASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
KRTAP4-1Q9BYQ7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms