Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDK5RAP1Q96SZ6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 MIR663A-201ENST00000385250 93 ntBASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 CROCCP5-201ENST00000436658 830 ntBASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 AC005181.1-201ENST00000604782 1256 ntBASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK5RAP1Q96SZ6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 ID1-201ENST00000376105 1233 ntBASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 CNN2P6-201ENST00000439038 900 ntBASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDK5RAP1Q96SZ6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 RBM17P2-201ENST00000616397 1405 ntBASIC21.85■■□□□ 1.09
CDK5RAP1Q96SZ6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 AC245052.3-201ENST00000450182 901 ntBASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK5RAP1Q96SZ6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 AC133561.1-201ENST00000568600 2415 ntBASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 AL162412.1-201ENST00000567129 965 ntBASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK5RAP1Q96SZ6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.83■■□□□ 1.08
CDK5RAP1Q96SZ6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDK5RAP1Q96SZ6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDK5RAP1Q96SZ6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 NCF1B-203ENST00000435988 1254 ntBASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.82■■□□□ 1.08
CDK5RAP1Q96SZ6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.81■■□□□ 1.08
CDK5RAP1Q96SZ6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms