Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 AC016769.1-201ENST00000409132 1010 ntBASIC20.25■□□□□ 0.83
COL26A1Q96A83 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL26A1Q96A83 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.25■□□□□ 0.83
COL26A1Q96A83 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.25■□□□□ 0.83
COL26A1Q96A83 AC137761.2-201ENST00000561729 223 ntBASIC20.25■□□□□ 0.83
COL26A1Q96A83 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.25■□□□□ 0.83
COL26A1Q96A83 AC145350.3-201ENST00000569033 163 ntBASIC20.25■□□□□ 0.83
COL26A1Q96A83 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL26A1Q96A83 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.25■□□□□ 0.83
COL26A1Q96A83 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL26A1Q96A83 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COL26A1Q96A83 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
COL26A1Q96A83 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL26A1Q96A83 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
COL26A1Q96A83 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL26A1Q96A83 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL26A1Q96A83 AC055733.4-201ENST00000638462 1354 ntBASIC20.24■□□□□ 0.83
COL26A1Q96A83 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL26A1Q96A83 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.24■□□□□ 0.83
COL26A1Q96A83 KRT18P29-201ENST00000397031 1267 ntBASIC20.24■□□□□ 0.83
COL26A1Q96A83 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.24■□□□□ 0.83
COL26A1Q96A83 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL26A1Q96A83 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.24■□□□□ 0.83
COL26A1Q96A83 KRT18P61-201ENST00000585825 1298 ntBASIC20.24■□□□□ 0.83
COL26A1Q96A83 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.24■□□□□ 0.83
COL26A1Q96A83 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL26A1Q96A83 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL26A1Q96A83 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.24■□□□□ 0.83
COL26A1Q96A83 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL26A1Q96A83 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL26A1Q96A83 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL26A1Q96A83 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL26A1Q96A83 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL26A1Q96A83 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL26A1Q96A83 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.23■□□□□ 0.83
COL26A1Q96A83 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL26A1Q96A83 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL26A1Q96A83 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL26A1Q96A83 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.23■□□□□ 0.83
COL26A1Q96A83 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.23■□□□□ 0.83
COL26A1Q96A83 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
COL26A1Q96A83 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL26A1Q96A83 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.23■□□□□ 0.83
COL26A1Q96A83 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL26A1Q96A83 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL26A1Q96A83 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COL26A1Q96A83 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL26A1Q96A83 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL26A1Q96A83 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL26A1Q96A83 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL26A1Q96A83 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 ITM2C-210ENST00000620962 501 ntBASIC20.22■□□□□ 0.83
COL26A1Q96A83 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL26A1Q96A83 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL26A1Q96A83 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL26A1Q96A83 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL26A1Q96A83 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL26A1Q96A83 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.21■□□□□ 0.83
COL26A1Q96A83 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL26A1Q96A83 RPS2P52-201ENST00000469610 820 ntBASIC20.21■□□□□ 0.83
COL26A1Q96A83 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.21■□□□□ 0.83
COL26A1Q96A83 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.21■□□□□ 0.83
COL26A1Q96A83 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.21■□□□□ 0.83
COL26A1Q96A83 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COL26A1Q96A83 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
COL26A1Q96A83 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 AP006587.3-201ENST00000525742 1516 ntBASIC20.21■□□□□ 0.83
COL26A1Q96A83 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL26A1Q96A83 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.2■□□□□ 0.82
COL26A1Q96A83 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.2■□□□□ 0.82
COL26A1Q96A83 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL26A1Q96A83 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL26A1Q96A83 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COL26A1Q96A83 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL26A1Q96A83 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL26A1Q96A83 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL26A1Q96A83 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COL26A1Q96A83 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.2■□□□□ 0.82
COL26A1Q96A83 AC104187.1-201ENST00000607510 612 ntBASIC20.2■□□□□ 0.82
COL26A1Q96A83 FAM99A-202ENST00000538190 1989 ntBASIC20.2■□□□□ 0.82
COL26A1Q96A83 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL26A1Q96A83 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms