Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 SLC7A5P1-201ENST00000568957 537 ntBASIC24.88■■□□□ 1.57
STAG1Q8WVM7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 BID-214ENST00000617586 542 ntTSL 5 BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 MYCNOS-205ENST00000641950 531 ntBASIC24.88■■□□□ 1.57
STAG1Q8WVM7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
STAG1Q8WVM7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
STAG1Q8WVM7 KRT16P2-201ENST00000414673 1423 ntBASIC24.86■■□□□ 1.57
STAG1Q8WVM7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
STAG1Q8WVM7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
STAG1Q8WVM7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
STAG1Q8WVM7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
STAG1Q8WVM7 CDCA4P2-201ENST00000441182 718 ntBASIC24.86■■□□□ 1.57
STAG1Q8WVM7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.86■■□□□ 1.57
STAG1Q8WVM7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
STAG1Q8WVM7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.86■■□□□ 1.57
STAG1Q8WVM7 RAP2CP1-201ENST00000605103 478 ntBASIC24.86■■□□□ 1.57
STAG1Q8WVM7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
STAG1Q8WVM7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 MFSD11-216ENST00000590393 1141 ntBASIC24.85■■□□□ 1.57
STAG1Q8WVM7 AC073111.5-205ENST00000641717 521 ntBASIC24.85■■□□□ 1.57
STAG1Q8WVM7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
STAG1Q8WVM7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 AC120498.10-201ENST00000621827 505 ntBASIC24.84■■□□□ 1.57
STAG1Q8WVM7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
STAG1Q8WVM7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.83■■□□□ 1.57
STAG1Q8WVM7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
STAG1Q8WVM7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
STAG1Q8WVM7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
STAG1Q8WVM7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.83■■□□□ 1.57
STAG1Q8WVM7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
STAG1Q8WVM7 Z98882.1-201ENST00000622160 2253 ntBASIC24.83■■□□□ 1.57
STAG1Q8WVM7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.83■■□□□ 1.56
STAG1Q8WVM7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.82■■□□□ 1.56
STAG1Q8WVM7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 AC011767.1-201ENST00000617410 1153 ntBASIC24.82■■□□□ 1.56
STAG1Q8WVM7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.82■■□□□ 1.56
STAG1Q8WVM7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
STAG1Q8WVM7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
STAG1Q8WVM7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
STAG1Q8WVM7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.81■■□□□ 1.56
STAG1Q8WVM7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.81■■□□□ 1.56
STAG1Q8WVM7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
STAG1Q8WVM7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
STAG1Q8WVM7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
STAG1Q8WVM7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms