Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 AC123595.1-201ENST00000440769 1046 ntBASIC20.78■□□□□ 0.92
SKA2Q8WVK7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SKA2Q8WVK7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.77■□□□□ 0.91
SKA2Q8WVK7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SKA2Q8WVK7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SKA2Q8WVK7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SKA2Q8WVK7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SKA2Q8WVK7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKA2Q8WVK7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 Z98882.1-201ENST00000622160 2253 ntBASIC20.75■□□□□ 0.91
SKA2Q8WVK7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 AC007375.3-201ENST00000600936 2314 ntBASIC20.75■□□□□ 0.91
SKA2Q8WVK7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 CCDC92B-201ENST00000575506 885 ntBASIC20.75■□□□□ 0.91
SKA2Q8WVK7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SKA2Q8WVK7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 KRT87P-202ENST00000534226 1464 ntBASIC20.74■□□□□ 0.91
SKA2Q8WVK7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SKA2Q8WVK7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 KRT18P14-201ENST00000534205 1250 ntBASIC20.73■□□□□ 0.91
SKA2Q8WVK7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms