Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
C3orf56Q8N813 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
C3orf56Q8N813 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
C3orf56Q8N813 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.46■□□□□ 0.23
C3orf56Q8N813 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
C3orf56Q8N813 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
C3orf56Q8N813 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.46■□□□□ 0.23
C3orf56Q8N813 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.46■□□□□ 0.23
C3orf56Q8N813 AC008403.3-201ENST00000598924 454 ntBASIC16.46■□□□□ 0.23
C3orf56Q8N813 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.46■□□□□ 0.23
C3orf56Q8N813 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.46■□□□□ 0.23
C3orf56Q8N813 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.46■□□□□ 0.22
C3orf56Q8N813 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
C3orf56Q8N813 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
C3orf56Q8N813 KRT17P2-201ENST00000300992 1314 ntBASIC16.45■□□□□ 0.22
C3orf56Q8N813 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 KRT16P2-201ENST00000414673 1423 ntBASIC16.45■□□□□ 0.22
C3orf56Q8N813 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 RN7SL471P-201ENST00000580476 299 ntBASIC16.45■□□□□ 0.22
C3orf56Q8N813 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C3orf56Q8N813 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
C3orf56Q8N813 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C3orf56Q8N813 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C3orf56Q8N813 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C3orf56Q8N813 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
C3orf56Q8N813 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C3orf56Q8N813 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C3orf56Q8N813 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C3orf56Q8N813 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.43■□□□□ 0.22
C3orf56Q8N813 AC138932.3-201ENST00000567634 1902 ntBASIC16.43■□□□□ 0.22
C3orf56Q8N813 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.43■□□□□ 0.22
C3orf56Q8N813 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
C3orf56Q8N813 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.43■□□□□ 0.22
C3orf56Q8N813 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.43■□□□□ 0.22
C3orf56Q8N813 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.43■□□□□ 0.22
C3orf56Q8N813 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
C3orf56Q8N813 BX088651.1-201ENST00000540551 451 ntBASIC16.43■□□□□ 0.22
C3orf56Q8N813 AP006587.3-201ENST00000525742 1516 ntBASIC16.43■□□□□ 0.22
C3orf56Q8N813 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C3orf56Q8N813 AC142381.3-201ENST00000568208 1670 ntBASIC16.43■□□□□ 0.22
C3orf56Q8N813 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C3orf56Q8N813 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C3orf56Q8N813 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C3orf56Q8N813 LINC01960-201ENST00000563759 1884 ntBASIC16.42■□□□□ 0.22
C3orf56Q8N813 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
C3orf56Q8N813 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C3orf56Q8N813 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.42■□□□□ 0.22
C3orf56Q8N813 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C3orf56Q8N813 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
C3orf56Q8N813 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.42■□□□□ 0.22
C3orf56Q8N813 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.42■□□□□ 0.22
C3orf56Q8N813 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.42■□□□□ 0.22
C3orf56Q8N813 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms