Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCML4Q8N228 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.97■■□□□ 1.11
SCML4Q8N228 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SCML4Q8N228 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.97■■□□□ 1.11
SCML4Q8N228 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SCML4Q8N228 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.97■■□□□ 1.11
SCML4Q8N228 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.97■■□□□ 1.11
SCML4Q8N228 DUX4L16-201ENST00000555130 1264 ntBASIC21.97■■□□□ 1.11
SCML4Q8N228 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SCML4Q8N228 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCML4Q8N228 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SCML4Q8N228 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SCML4Q8N228 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.97■■□□□ 1.11
SCML4Q8N228 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCML4Q8N228 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCML4Q8N228 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCML4Q8N228 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCML4Q8N228 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCML4Q8N228 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SCML4Q8N228 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCML4Q8N228 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SCML4Q8N228 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
SCML4Q8N228 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCML4Q8N228 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCML4Q8N228 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.96■■□□□ 1.11
SCML4Q8N228 AC010536.3-201ENST00000620306 533 ntBASIC21.96■■□□□ 1.11
SCML4Q8N228 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.96■■□□□ 1.11
SCML4Q8N228 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SCML4Q8N228 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SCML4Q8N228 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.96■■□□□ 1.11
SCML4Q8N228 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCML4Q8N228 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCML4Q8N228 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.96■■□□□ 1.11
SCML4Q8N228 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
SCML4Q8N228 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCML4Q8N228 FBXW4P1-201ENST00000426721 2239 ntBASIC21.95■■□□□ 1.1
SCML4Q8N228 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCML4Q8N228 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.95■■□□□ 1.1
SCML4Q8N228 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
SCML4Q8N228 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.95■■□□□ 1.1
SCML4Q8N228 AC080038.1-201ENST00000611274 1154 ntBASIC21.95■■□□□ 1.1
SCML4Q8N228 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.95■■□□□ 1.1
SCML4Q8N228 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCML4Q8N228 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCML4Q8N228 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCML4Q8N228 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCML4Q8N228 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCML4Q8N228 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCML4Q8N228 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SCML4Q8N228 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SCML4Q8N228 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCML4Q8N228 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCML4Q8N228 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCML4Q8N228 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCML4Q8N228 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SCML4Q8N228 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SCML4Q8N228 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SCML4Q8N228 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.94■■□□□ 1.1
SCML4Q8N228 RBM17P2-201ENST00000616397 1405 ntBASIC21.94■■□□□ 1.1
SCML4Q8N228 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.94■■□□□ 1.1
SCML4Q8N228 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCML4Q8N228 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.94■■□□□ 1.1
SCML4Q8N228 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCML4Q8N228 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCML4Q8N228 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCML4Q8N228 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
SCML4Q8N228 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.93■■□□□ 1.1
SCML4Q8N228 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCML4Q8N228 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.93■■□□□ 1.1
SCML4Q8N228 TERF1P5-201ENST00000477545 1207 ntBASIC21.93■■□□□ 1.1
SCML4Q8N228 AC007322.4-201ENST00000509611 723 ntBASIC21.93■■□□□ 1.1
SCML4Q8N228 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.93■■□□□ 1.1
SCML4Q8N228 RAP2CP1-201ENST00000605103 478 ntBASIC21.93■■□□□ 1.1
SCML4Q8N228 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCML4Q8N228 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.92■■□□□ 1.1
SCML4Q8N228 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.92■■□□□ 1.1
SCML4Q8N228 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SCML4Q8N228 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCML4Q8N228 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCML4Q8N228 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SCML4Q8N228 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.92■■□□□ 1.1
SCML4Q8N228 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.92■■□□□ 1.1
SCML4Q8N228 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SCML4Q8N228 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SCML4Q8N228 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.92■■□□□ 1.1
SCML4Q8N228 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SCML4Q8N228 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.92■■□□□ 1.1
SCML4Q8N228 AC231657.2-201ENST00000624556 255 ntBASIC21.92■■□□□ 1.1
SCML4Q8N228 AC073111.5-205ENST00000641717 521 ntBASIC21.92■■□□□ 1.1
SCML4Q8N228 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.92■■□□□ 1.1
SCML4Q8N228 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCML4Q8N228 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.92■■□□□ 1.1
SCML4Q8N228 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SCML4Q8N228 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.91■■□□□ 1.1
SCML4Q8N228 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.91■■□□□ 1.1
SCML4Q8N228 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.91■■□□□ 1.1
SCML4Q8N228 CDCA4P2-201ENST00000441182 718 ntBASIC21.91■■□□□ 1.1
SCML4Q8N228 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.91■■□□□ 1.1
SCML4Q8N228 RARRES2P11-201ENST00000635158 484 ntBASIC21.91■■□□□ 1.1
SCML4Q8N228 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms